Pre_GI Gene

Host: NC_008319:478499 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008319:478499 Synechococcus sp. CC9311, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain was isolated in 1993 from the oligotrophic edge of the California Current after nitrate enrichment and low light incubation at a depth of 95m in 1993. Photosynthesis. Coastal aquatic environment.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
478014478502489low molecular weight phosphotyrosine protein phosphatase family proteinQuickGO ontologyBLASTP
478499479128630phycocyanin alpha subunit phycocyanobilin lyase CpcF subunitQuickGO ontologyBLASTP
479125479922798phycocyanin alpha subunit phycocyanobilin lyase CpcE subunitQuickGO ontologyBLASTP
479924480514591Protein of unknown function DUF1001 superfamily proteinQuickGO ontologyBLASTP
480605481093489phycocyanin alpha subunitQuickGO ontologyBLASTP
481134481652519phycocyanin beta subunitQuickGO ontologyBLASTP
481841482614774Phycoerythrobilinferredoxin oxidoreductaseQuickGO ontologyBLASTP
4826114833577471516-dihydrobiliverdinferredoxin oxidoreductaseQuickGO ontologyBLASTP
483335483937603hypothetical proteinBLASTP
483934484206273hypothetical proteinBLASTP
484353484550198hypothetical protein
484551485105555C-phycoerythrin class I beta chainQuickGO ontologyBLASTP
485165485659495C-phycoerythrin class I alpha chainQuickGO ontologyBLASTP
485735486640906Bilin biosynthesis protein mpeVQuickGO ontologyBLASTP
486701487132432hypothetical proteinBLASTP
4876194889471329Bilin biosynthesis protein cpeYQuickGO ontologyBLASTP
488981489652672Bilin biosynthesis protein cpeZQuickGO ontologyBLASTP
489649490524876Bilin biosynthesis protein mpeUQuickGO ontologyBLASTP
490716491444729Phycoerythrin class II gamma chain linker polypeptideQuickGO ontologyBLASTP
491491491625135hypothetical protein
491835492332498C-phycoerythrin class II alpha chainQuickGO ontologyBLASTP
492376492963588C-phycoerythrin class II beta chainQuickGO ontologyBLASTP
4931074943031197CpeY proteinQuickGO ontologyBLASTP
494479494799321hypothetical proteinBLASTP
494793495101309hypothetical proteinBLASTP
495665496291627hypothetical proteinBLASTP
496306496845540phycoerythrin linker protein CpeSQuickGO ontologyBLASTP
497117497851735possible phycobilisome linker polypeptideQuickGO ontologyBLASTP
4979294994371509phycobilisome linker polypeptideQuickGO ontologyBLASTP
499633500517885phycobilisome linker polypeptideQuickGO ontologyBLASTP
500678501367690pentapeptide repeat family proteinQuickGO ontologyBLASTP
501372502130759possible phycobilisome rod-core linker polypeptide L-RC 285QuickGO ontologyBLASTP
502383503213831Possible phycobilisome linker polypeptideQuickGO ontologyBLASTP
503415503933519possible Phycobilisome polypeptideQuickGO ontologyBLASTP
503983504435453hypothetical proteinBLASTP
505038505466429hypothetical protein
505458505784327hypothetical proteinBLASTP
507171507710540hypothetical protein
507721507894174hypothetical protein
508104508289186hypothetical protein
50847650854873tRNA-PheQuickGO ontologyBLASTP
508579509208630hypothetical proteinBLASTP
509228509515288hypothetical protein
509549509662114hypothetical protein
5096815109581278Carbohydrate kinase FGGY family proteinQuickGO ontologyBLASTP
5109695122281260S-adenosylmethionine synthetaseQuickGO ontologyBLASTP
512266513057792Haloacid dehalogenaseepoxide hydrolase family proteinQuickGO ontologyBLASTP
513071513988918ribosomal protein S1QuickGO ontologyBLASTP
514273514749477transcriptional regulator NrdR family proteinQuickGO ontologyBLASTP
51488551498096Photosystem II reaction centre T protein superfamily proteinQuickGO ontology
5150025165641563photosystem II P680 chlorophyll A apoproteinQuickGO ontologyBLASTP
516682517275594possible ferredoxin 2Fe-2SQuickGO ontologyBLASTP
517336517446111photosystem II reaction center protein PsbMQuickGO ontology
517475518323849universal stress protein family proteinQuickGO ontologyBLASTP