Pre_GI Gene

Host: NC_008345:2717945 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008345:2717945 Shewanella frigidimarina NCIMB 400, complete genome

Host Lineage: Shewanella frigidimarina; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from the North Sea near Aberdeen, United Kingdom. Iron-reducing marine bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella frigidimarina is an iron-reducing marine bacterium. This organism have been isolated from seawater, sea ice, and marine algae.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
27179452718682738protein of unknown function DUF1538QuickGO ontologyBLASTP
27187132719480768protein of unknown function DUF1538QuickGO ontologyBLASTP
27194842719834351putative nitrogen regulatory protein P-IIQuickGO ontologyBLASTP
27198312720235405putative signal-transduction protein with CBS domainsQuickGO ontologyBLASTP
27202652721134870transcriptional regulator LysR family proteinQuickGO ontologyBLASTP
27213752721578204hypothetical protein
272158227226191038oxidoreductase domain proteinQuickGO ontologyBLASTP
27225812722985405NUDIX hydrolaseQuickGO ontologyBLASTP
27230342723468435hypothetical proteinBLASTP
27239942724470477hypothetical protein
27244672724988522cation antiporterQuickGO ontologyBLASTP
27249912725272282multiple resistance and pH regulation protein FQuickGO ontologyBLASTP
27252652725624360monovalent cationproton antiporter MnhGPhaG subunitQuickGO ontologyBLASTP
27256212726601981NaH antiporter MnhB subunit-related proteinQuickGO ontologyBLASTP
27265982726957360NADH-ubiquinone oxidoreductase chain 4LQuickGO ontologyBLASTP
272696327282761314NADH dehydrogenase quinoneQuickGO ontologyBLASTP
27282452728454210putative multicomponent NaH antiporter subunit DQuickGO ontologyBLASTP
272845127299171467NADH dehydrogenase quinoneQuickGO ontologyBLASTP
27299192730233315hypothetical proteinBLASTP
273022327319321710NADH dehydrogenase quinoneQuickGO ontologyBLASTP
273279927354172619ATPase P-type transporting HAD superfamily subfamily ICQuickGO ontologyBLASTP
27354192736003585protein of unknown function DUF125 transmembraneQuickGO ontologyBLASTP
27360102736279270protein of unknown function DUF211QuickGO ontologyBLASTP
27368782737297420transcriptional regulator MarR family proteinQuickGO ontologyBLASTP
27375762738046471hypothetical protein
273805627411273072FAD linked oxidase domain proteinQuickGO ontologyBLASTP