Pre_GI Gene

Host: NC_008390:407315 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008390:407315 Burkholderia cepacia AMMD chromosome 1, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Isolated from the rhizosphere of healthy pea plants in Wisconsin, USA, in 1985. Pathogenic in cystic fibrosis patients. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4073154104883174Rhs element Vgr proteinQuickGO ontologyBLASTP
4105394151014563YD repeat proteinQuickGO ontologyBLASTP
415101415484384hypothetical proteinBLASTP
416125416580456hypothetical proteinBLASTP
418105418500396hypothetical proteinBLASTP
419903420196294hypothetical proteinBLASTP
420594420902309hypothetical protein
420910421167258hypothetical protein
421479421844366hypothetical proteinBLASTP
421936422718783hypothetical proteinBLASTP
4227154240611347protein of unknown function DUF876QuickGO ontologyBLASTP
424166424774609hypothetical proteinBLASTP
425150425788639Tetratricopeptide TPR_2 repeat proteinQuickGO ontologyBLASTP
425833426348516Uncharacterised conserved protein UCP028301QuickGO ontologyBLASTP
4263644278541491protein of unknown function DUF877QuickGO ontologyBLASTP
427925428428504protein of unknown function DUF796QuickGO ontologyBLASTP
428491428976486protein of unknown function DUF1316QuickGO ontologyBLASTP
4290544308891836protein of unknown function DUF879QuickGO ontologyBLASTP
4308534319531101protein of unknown function DUF1305QuickGO ontologyBLASTP
4319974346662670ATPase AAA-2 domain proteinQuickGO ontologyBLASTP
4347064358271122ImpA domain proteinQuickGO ontologyBLASTP
435878436756879hypothetical proteinBLASTP