Pre_GI Gene

Host: NC_008525:1202852 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008525:1202852 Pediococcus pentosaceus ATCC 25745, complete genome

Host Lineage: Pediococcus pentosaceus; Pediococcus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Use in fermentation of food products. A distinctive characteristic of pediococci is their ability to form tetrads via cell division in two perpendicular directions in a single plane. Like other lactic acid bacteria, species of Pediococcus are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative (homofermentative) facultatively anaerobic metabolism with lactic acid as the major metabolic end product. They also occur in such food products as cured meat, raw sausages, and marinated fish, and are are used for biotechnological processing and preservation of foods. This bacterium can be isolated from a variety of plant materials and bacterial-ripened cheeses. This organism is used as an acid producing starter culture in the fermentation of some sausages, cucumbers, green beans, soy milk, and silage. Some strains have been reported to contain several (3-5) resident plasmids that render the bacterium capable of fermenting some sugars (raffinose, melibiose, and sucrose), as well as producing bacteriocins.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12028521203661810NAD kinaseQuickGO ontologyBLASTP
12036641204278615Uncharacterized protein RelA_SpoT domainQuickGO ontologyBLASTP
12044461205042597Dithiol-disulfide isomeraseQuickGO ontologyBLASTP
120506412060891026Competence proteinQuickGO ontologyBLASTP
12061861206911726Negative regulator of genetic competence sporulation and motilityQuickGO ontologyBLASTP
12070891207487399Arsenate reductase related protein glutaredoxin familyQuickGO ontologyBLASTP
12077441208481738Metal-dependent hydrolase of the beta-lactamase superfamily IIIQuickGO ontologyBLASTP
12085911209076486MonooxygenaseQuickGO ontologyBLASTP
12091321209350219hypothetical protein
1209541120961171tRNA-CysQuickGO ontology
1209696120977984tRNA-LeuQuickGO ontologyBLASTP
1209827120989973tRNA-HisQuickGO ontologyBLASTP
1209905120997874tRNA-TrpQuickGO ontology
1210023121009573tRNA-PheQuickGO ontology
1210118121019174tRNA-AspQuickGO ontologyBLASTP
1210210121028273tRNA-ValQuickGO ontologyBLASTP
1210290121036172tRNA-GluQuickGO ontologyBLASTP
1210380121047192tRNA-SerQuickGO ontologyBLASTP
1210484121055673tRNA-AsnQuickGO ontologyBLASTP
121056212106791185S ribosomal RNAQuickGO ontologyBLASTP
12107731213695292323S ribosomal RNAQuickGO ontologyBLASTP
12139241215503158016S ribosomal RNAQuickGO ontologyBLASTP
12158281216202375RNA binding protein S1 domainQuickGO ontologyBLASTP
12163151216959645Uncharacterized membrane-associated proteinQuickGO ontologyBLASTP
12169561217582627Predicted membrane proteinQuickGO ontologyBLASTP
12175731218349777Predicted sugar phosphatase of the HAD superfamilyQuickGO ontologyBLASTP
12183501218886537hypothetical proteinBLASTP
12189491219557609Predicted phosphoesterase or phosphohydrolaseQuickGO ontologyBLASTP
121955412209181365Gamma-aminobutyrate permease related permeaseQuickGO ontologyBLASTP
122101012220141005Adenine-specific DNA methylaseQuickGO ontologyBLASTP
12220321222346315hypothetical protein
12223151222749435hypothetical proteinBLASTP
12227271222912186hypothetical protein
12228931223252360hypothetical protein
12233321223637306Competence protein ComGCQuickGO ontology
122363412246441011Type II secretory pathwaycompetence componentQuickGO ontologyBLASTP
12246221225584963Type II secretory pathwaycompetence component ATPaseQuickGO ontologyBLASTP
12257031226614912Sugar kinase ribokinase familyQuickGO ontologyBLASTP