Pre_GI Gene

Host: NC_008543:2220698 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008543:2220698 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
222069822240723375membrane protein-like proteinQuickGO ontologyBLASTP
222406922254271359hypothetical protein
22255992226387789GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
22266812226986306NIPSNAP family containing proteinQuickGO ontologyBLASTP
22270902227947858NADPH-dependent FMN reductaseQuickGO ontologyBLASTP
22281812228399219hypothetical proteinBLASTP
22289482229292345hypothetical proteinBLASTP
22294672229790324transcriptional regulator XRE familyQuickGO ontologyBLASTP
22297832230670888protein of unknown function DUF955QuickGO ontologyBLASTP
22307192231345627hypothetical proteinBLASTP
22315192231959441hypothetical proteinBLASTP
223224022336041365pyridine nucleotide-disulphide oxidoreductase dimerisation regionQuickGO ontologyBLASTP
223471522360401326major facilitator superfamily MFS_1QuickGO ontologyBLASTP
22361922236836645two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
223682922387271899multi-sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
22387672239072306response regulator receiver proteinQuickGO ontologyBLASTP
22394022240349948transcriptional regulator LysR familyQuickGO ontologyBLASTP
22407262241010285hypothetical protein
22410182241389372transport-associatedQuickGO ontologyBLASTP
22416622242096435hypothetical proteinBLASTP
224277022440681299cytochrome c class IQuickGO ontologyBLASTP
224408422463182235Isoquinoline 1-oxidoreductaseQuickGO ontologyBLASTP
224632022467754562Fe-2S-binding domain proteinQuickGO ontologyBLASTP
224738622490741689cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
224939822505401143transcriptional regulator LysR familyQuickGO ontologyBLASTP
22506952251528834alphabeta hydrolase foldQuickGO ontologyBLASTP
225163122538172187catalaseperoxidase HPIQuickGO ontologyBLASTP
22542632254982720hypothetical proteinBLASTP
22553822255906525hypothetical proteinBLASTP
22564082257346939transcriptional regulator AraC familyQuickGO ontologyBLASTP
22574262257707282hypothetical proteinBLASTP
22579292258468540alkylhydroperoxidase like protein AhpD familyQuickGO ontologyBLASTP
225858822597871200major facilitator superfamily MFS_1QuickGO ontologyBLASTP
22598492260607759short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP