Pre_GI Gene

Host: NC_008543:259450 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008543:259450 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
259450260379930transcriptional regulator LysR familyQuickGO ontologyBLASTP
260495260989495hypothetical protein
2610272620461020hypothetical proteinBLASTP
2621032635691467Betaine-aldehyde dehydrogenaseQuickGO ontologyBLASTP
2635772646441068iron-containing alcohol dehydrogenaseQuickGO ontologyBLASTP
264753265064312YCII-relatedQuickGO ontologyBLASTP
265068265403336Rieske 2Fe-2S domain proteinQuickGO ontologyBLASTP
2655962666841089porin Gram-negative typeQuickGO ontologyBLASTP
266825267076252hypothetical protein
267173267976804hypothetical protein
268225269040816MltA-interacting MipA family proteinQuickGO ontologyBLASTP
269049269723675two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
2697752711601386periplasmic sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
271168271764597hypothetical protein
272147272947801Integrase catalytic regionQuickGO ontologyBLASTP
272968273234267transposase IS3IS911 family proteinQuickGO ontologyBLASTP
273312273596285hypothetical proteinBLASTP
2738072756361830glucosamine--fructose-6-phosphate aminotransferase isomerizingQuickGO ontologyBLASTP
275793276284492transcriptional regulator AsnC familyQuickGO ontologyBLASTP
2763142771688553-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
277247278065819transcriptional regulator AraC familyQuickGO ontologyBLASTP
278079278612534methylated-DNA--protein-cysteine methyltransferaseQuickGO ontologyBLASTP
2786092800871479transcriptional regulator AraC familyQuickGO ontologyBLASTP
2804102817021293major facilitator superfamily MFS_1QuickGO ontologyBLASTP
2817792828881110transcriptional regulator LacI familyQuickGO ontologyBLASTP