Pre_GI Gene

Host: NC_008593:1631438 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008593:1631438 Clostridium novyi NT, complete genome

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16314381632130693phosphodiesterase MJ0936 family subfamilyQuickGO ontologyBLASTP
163238816338151428guanine-hypoxanthine permeaseQuickGO ontologyBLASTP
163424316392374995phosphoribosylformylglycinamidine synthaseQuickGO ontologyBLASTP
163926616407681503bifunctional purine biosynthesis protein PurHQuickGO ontologyBLASTP
16407951641415621phosphoribosylglycinamide formyltransferaseQuickGO ontologyBLASTP
16414031642398996phosphoribosylformylglycinamidine cyclo-ligaseQuickGO ontologyBLASTP
164240716437831377amidophosphoribosyltransferaseQuickGO ontologyBLASTP
16438011644508708phosphoribosylaminoimidazole-succinocarboxamide synthaseQuickGO ontologyBLASTP
16445101644989480phosphoribosylaminoimidazole carboxylase catalytic subunitQuickGO ontologyBLASTP
164521916466071389sodiumalanine symporter family proteinQuickGO ontologyBLASTP
16470251647543519hypothetical proteinBLASTP
16479161648512597uncharacterized membrane proteinQuickGO ontologyBLASTP
164928916505961308branched-chain amino acid transport system II carrier proteinQuickGO ontologyBLASTP