Pre_GI Gene

Host: NC_008700:1994829 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008700:1994829 Shewanella amazonensis SB2B, complete genome

Host Lineage: Shewanella amazonensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from shallow marine deposits (coastal shelf mud) of the Amazon River delta off of the coast of Brazil. Iron-reducing bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella amazonensis is capable of anaerobically reducing iron, manganese, and sulfur compounds and may be important to the cycling of these compounds in the environment.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19948291995719891transcriptional regulator LysR familyQuickGO ontologyBLASTP
199592419974171494Histidine ammonia-lyaseQuickGO ontologyBLASTP
199743519994472013Urocanate hydrataseQuickGO ontologyBLASTP
19998272000741915site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
20011442001548405hypothetical protein
200233420036231290hypothetical proteinBLASTP
20042522004674423acetyltransferase GNAT familyQuickGO ontologyBLASTP
20048312005097267conserved hypothetical protein
200509720058347383-deoxy-manno-octulosonate cytidylyltransferaseQuickGO ontologyBLASTP
200589020069601071alcohol dehydrogenase iron-containingQuickGO ontologyBLASTP
200698020081671188polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
20083182008929612Carbonate dehydrataseQuickGO ontologyBLASTP
20090882009501414conserved hypothetical proteinBLASTP
200951420106951182gram negative topoisomerase IV subunit BQuickGO ontologyBLASTP
20108332011660828alphabeta hydrolase foldQuickGO ontologyBLASTP
20116532012291639D-alanyl-D-alanine carboxypeptidase-related proteinQuickGO ontologyBLASTP
201234520134931149succinyl-diaminopimelate desuccinylaseQuickGO ontologyBLASTP
20134902013834345conserved hypothetical proteinBLASTP
20139242014433510Protein-Npi-phosphohistidine--sugar phosphotransferaseQuickGO ontologyBLASTP
201450520162081704phosphotransferase system enzyme IQuickGO ontologyBLASTP