Pre_GI Gene

Host: NC_008789:7347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008789:7347 Halorhodospira halophila SL1, complete genome

Host Lineage: Halorhodospira halophila; Halorhodospira; Ectothiorhodospiraceae; Chromatiales; Proteobacteria; Bacteria

General Information: Halorhodospira halophila SL1 was isolated from salt lake mud. Sulfur-oxidizing extreme halophile. This organism, formerly Ectothiorhodospira halophila is alkaliphilic, phototrophic, halophile. This is one of the most halophilic eubacteria known, and produces organic solutes such as glycine betaine, ectoine, and trehalose to balance the osmotic pressure. This organism oxidizes sulfide to sulfur, which is deposited outside the cell and further oxidized to sulfate. This organism also produces a blue light sensor called photoactive yellow protein which is involved in signal transduction.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
631673711056DNA polymerase III delta prime subunitQuickGO ontologyBLASTP
734784771131aminotransferase class VQuickGO ontologyBLASTP
87129485774short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
957810555978D-isomer specific 2-hydroxyacid dehydrogenase NAD-bindingQuickGO ontologyBLASTP
1065811284627molybdopterin-guanine dinucleotide biosynthesis protein BQuickGO ontologyBLASTP
11435133391905AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
1340014152753protein of unknown function DUF980QuickGO ontologyBLASTP
14225154241200TraB family proteinQuickGO ontologyBLASTP
15439169921554peptide chain release factor 3QuickGO ontologyBLASTP
1721417708495hypothetical protein
1787718401525beta-hydroxyacyl-acyl-carrier-protein dehydratase FabAQuickGO ontologyBLASTP
18440196571218beta-ketoacyl synthaseQuickGO ontologyBLASTP
19722211161395oxygen-independent coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
21085222961212hypothetical protein
223582243174tRNA-CysQuickGO ontology
224942257885tRNA-LeuQuickGO ontology
2273023281552CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseQuickGO ontologyBLASTP
23291251321842excinuclease ABC C subunitQuickGO ontologyBLASTP
2534025990651two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
2608026922843pyrimidine reductase riboflavin biosynthesis RibDQuickGO ontologyBLASTP
26958283551398fumarate lyaseQuickGO ontologyBLASTP
28460298271368adenylosuccinate lyaseQuickGO ontologyBLASTP
2989930540642NUDIX hydrolaseQuickGO ontologyBLASTP