Pre_GI Gene

Host: NC_009012:3354477 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009012:3354477 Clostridium thermocellum ATCC 27405, complete genome

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
335447733563181842conserved hypothetical protein precursorQuickGO ontologyBLASTP
335634533575831239hypothetical proteinBLASTP
33580873358431345hypothetical proteinBLASTP
33584583358892435hypothetical proteinBLASTP
33588673359211345hypothetical proteinBLASTP
33593363359644309hypothetical proteinBLASTP
336046633616711206conserved hypothetical protein precursorQuickGO ontologyBLASTP
33616763361972297hypothetical protein
33621703362559390hypothetical proteinBLASTP
336282233649752154phage plasmid primase P4 familyQuickGO ontologyBLASTP
336524733665601314phage major capsid protein HK97QuickGO ontologyBLASTP
33668193367121303hypothetical proteinBLASTP
336744933687051257transposase IS116IS110IS902QuickGO ontologyBLASTP
33691383369425288hypothetical proteinBLASTP
33696413369937297hypothetical proteinBLASTP
33701943370994801prophage Lp4 protein 7 DNA replicationQuickGO ontologyBLASTP
337139033732371848conserved hypothetical protein precursorQuickGO ontologyBLASTP
337326133744991239hypothetical proteinBLASTP
33747083375235528hypothetical proteinBLASTP
33752483375718471hypothetical proteinBLASTP
337599133771271137transposase mutator typeQuickGO ontologyBLASTP
33777003378047348hypothetical proteinBLASTP
337819033799001711BLASTP
33799023380144243hypothetical proteinBLASTP
33802493380851603hypothetical protein
338106533820691005conserved hypothetical protein precursorQuickGO ontologyBLASTP
33824303382819390hypothetical proteinBLASTP
338307633852292154phage plasmid primase P4 familyQuickGO ontologyBLASTP
338550033868131314phage major capsid protein HK97QuickGO ontologyBLASTP
33871383387440303hypothetical proteinBLASTP
338779333890491257transposase IS116IS110IS902QuickGO ontologyBLASTP
33895053389798294hypothetical protein
339024633915471302protein of unknown function DUF21QuickGO ontologyBLASTP
33915873392099513TipAS antibiotic-recognitionQuickGO ontologyBLASTP
339218233938821701glycoside hydrolase family 5QuickGO ontologyBLASTP
33941853394886702hypothetical proteinBLASTP
339528433971011818Phosphoenolpyruvate carboxykinase GTPQuickGO ontologyBLASTP
33983763398909534sigma 54 modulation proteinribosomal protein S30EAQuickGO ontologyBLASTP
339902434012492226ATP-dependent DNA helicase PcrAQuickGO ontologyBLASTP