Pre_GI Gene

Host: NC_009455:273519 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009455:273519 Dehalococcoides sp. BAV1 chromosome, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2735192744579394Fe-4S ferredoxinQuickGO ontologyBLASTP
2744782756591182polysulphide reductase NrfDQuickGO ontologyBLASTP
2756522788643213molybdopterin oxidoreductase Fe4S4 regionQuickGO ontologyBLASTP
278887279576690hypothetical proteinBLASTP
2795772807221146molybdenum cofactor guanylyltransferaseQuickGO ontologyBLASTP
280911281219309hypothetical proteinBLASTP
282146282451306
282499282777279transposase IS3IS911 family proteinQuickGO ontologyBLASTP
282918283613696integrase catalytic subunitQuickGO ontologyBLASTP
284016284702687two component transcriptional regulatorQuickGO ontologyBLASTP
2847022879143213histidine kinaseQuickGO ontologyBLASTP
2881322897031572reductive dehalogenaseQuickGO ontologyBLASTP
289727289999273hypothetical proteinBLASTP
290133290546414hypothetical proteinBLASTP
2907222922061485radical SAM domain-containing proteinQuickGO ontologyBLASTP
292229292978750radical SAM domain-containing proteinQuickGO ontologyBLASTP
2930452944571413reductive dehalogenaseQuickGO ontologyBLASTP
294482294757276hypothetical proteinBLASTP
294908295174267hypothetical proteinBLASTP
2951982966881491reductive dehalogenaseQuickGO ontologyBLASTP
296763297491729putative ATP binding proteinQuickGO ontologyBLASTP
297683298363681two component transcriptional regulatorQuickGO ontologyBLASTP
298344298790447histidine kinaseQuickGO ontologyBLASTP
298979299257279transposase IS3IS911 family proteinQuickGO ontologyBLASTP
299398300093696integrase catalytic subunitQuickGO ontologyBLASTP
3000863019301845putative PASPAC sensor proteinQuickGO ontologyBLASTP
302601302891291BLASTP
302909303697789integrase catalytic subunitQuickGO ontologyBLASTP
303835304119285transposase IS3IS911 family proteinQuickGO ontologyBLASTP
304200304961762histidine kinaseQuickGO ontologyBLASTP
304962305693732two component LuxR family transcriptional regulatorQuickGO ontologyBLASTP
3059573074951539reductive dehalogenaseQuickGO ontologyBLASTP
307553307783231hypothetical proteinBLASTP
308094308381288hypothetical proteinBLASTP
308492308707216XRE family transcriptional regulatorQuickGO ontologyBLASTP
308790309389600hypothetical proteinBLASTP
309434309559126hypothetical proteinBLASTP
309679310638960hypothetical proteinBLASTP
3106353122811647resolvase domain-containing proteinQuickGO ontologyBLASTP
312287313114828patatinQuickGO ontologyBLASTP
313092313727636N-acetyltransferase GCN5QuickGO ontologyBLASTP
3137323153241593hypothetical proteinBLASTP
315321315920600hypothetical proteinBLASTP
3159903171951206hypothetical proteinBLASTP
317320317943624lysine exporter protein LysEYggAQuickGO ontologyBLASTP
3179703189951026histone deacetylase superfamily proteinQuickGO ontologyBLASTP
318969319904936cation diffusion facilitator family transporterQuickGO ontologyBLASTP
319927320832906preprotein translocase subunit SecFQuickGO ontologyBLASTP
3208253221741350preprotein translocase subunit SecDQuickGO ontologyBLASTP
3221883236841497polynucleotide adenylyltransferasemetal dependent phosphohydrolaseQuickGO ontologyBLASTP
323844324245402helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP