Pre_GI Gene

Host: NC_009464:379377 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009464:379377 Uncultured methanogenic archaeon RC-I, complete genome

Host Lineage: Methanocella arvoryzae; Methanocella; Methanocellaceae; Methanocellales; Euryarchaeota; Archaea

General Information: This organism is a key methane producer in the rhizome of rice. A large portion of the methane that is emitted in rice fields is produced by methanogenic archaea. Rice Cluster I (RC-I) methanogens in the rice rhizosphere play a key role in this methane production.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3793773812781902hypothetical proteinBLASTP
3813833828401458putative K uptake system membrane componentQuickGO ontologyBLASTP
383054383347294hypothetical protein
383739384215477hypothetical proteinBLASTP
3845283857481221hypothetical protein
385901386527627putative lysine exporter LysE familyQuickGO ontologyBLASTP
386576386956381hypothetical proteinBLASTP
3880733892811209transposaseQuickGO ontologyBLASTP
3904423918091368hypothetical proteinBLASTP
3918953929771083hypothetical protein
392938393846909hypothetical proteinBLASTP
3944513960431593transposase IS4QuickGO ontologyBLASTP
3962293974791251integraseQuickGO ontologyBLASTP
398120399010891putative lipoate synthetase pyruvate dehydrogenase cofactorQuickGO ontologyBLASTP
3990134000921080pyruvate dehydrogenase complex E1 transketolase alpha subunitQuickGO ontologyBLASTP
400094401071978pyruvate dehydrogenase complex E1 transketolase beta subunitQuickGO ontologyBLASTP
4010854023711287pyruvate dehydrogenase complex E2 dihydrolipoamide acetyltransferaseQuickGO ontologyBLASTP
4023834037861404pyruvate dehydrogenase complex E3 dihydrolipoamide dehydrogenaseQuickGO ontologyBLASTP
404160404900741lipoate-protein ligase A C-terminal fragmentQuickGO ontologyBLASTP
404888405175288lipoate-protein ligase A N-terminal fragmentQuickGO ontologyBLASTP
405172405516345predicted rhodanese-like proteinQuickGO ontologyBLASTP
405770406222453hypothetical protein
4062894079981710putative long chain fatty-acid CoA ligaseQuickGO ontologyBLASTP