Pre_GI Gene

Host: NC_009482 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009482:87193 Synechococcus sp. RCC307 chromosome, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Marine Synechococcus and Prochlorococcus are the most abundant photosynthetic organisms on earth and between them account for about half of the world's photosynthesis. RCC307 is an oceanic Synechococcus strain which presents great phylogenetic interest because trees obtained using its 16S RNA gene seem to indicate that it is rooted at the base of the radiation of marine cyanobacteria. This strain was isolated from seawater taken at a depth of 15 meters from the Mediterranean Sea.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
87193882931101transcriptional regulatorQuickGO ontologyBLASTP
8823889020783putative carboxymethylenebutenolidaseQuickGO ontologyBLASTP
8901789664648translation initiation factor IF-3QuickGO ontologyBLASTP
8971290602891tRNA delta2-isopentenylpyrophosphatetransferaseQuickGO ontologyBLASTP
90734927071974DNA gyrase subunit BQuickGO ontologyBLASTP
9270793027321hypothetical proteinBLASTP
9302093442423hypothetical proteinBLASTP
9343593848414hypothetical proteinBLASTP
9381794287471glutathione peroxidaseQuickGO ontologyBLASTP
94359957411383MgCoNi transporter MgtEQuickGO ontologyBLASTP
9582196795975sigma-70 family RNA polymerase sigma factorQuickGO ontologyBLASTP
9676197672912DMT family permeaseQuickGO ontologyBLASTP
9782098803984hypothetical proteinBLASTP
988711001901320glysosyltransferaseQuickGO ontologyBLASTP
100196100954759hypothetical protein
1009261020861161AG-specific DNA glycosylaseQuickGO ontologyBLASTP
102086103057972fructokinaseQuickGO ontologyBLASTP
103032103475444hypothetical proteinBLASTP
1035471049831437S-adenosyl-L-homocysteine hydrolaseQuickGO ontologyBLASTP
105034105693660hypothetical proteinBLASTP
105696106070375single-stranded DNA-binding proteinQuickGO ontologyBLASTP
1062101072711062rod shape-determining protein MreBQuickGO ontologyBLASTP
107275108012738rod shape-determining protein MreCQuickGO ontologyBLASTP
107994108518525hypothetical protein
1085081097821275sugar ABC transporter periplasmic proteinQuickGO ontologyBLASTP
109897110670774two-component system response regulatorQuickGO ontologyBLASTP