Pre_GI Gene

Host: NC_009482:485238 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009482:485238 Synechococcus sp. RCC307 chromosome, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Marine Synechococcus and Prochlorococcus are the most abundant photosynthetic organisms on earth and between them account for about half of the world's photosynthesis. RCC307 is an oceanic Synechococcus strain which presents great phylogenetic interest because trees obtained using its 16S RNA gene seem to indicate that it is rooted at the base of the radiation of marine cyanobacteria. This strain was isolated from seawater taken at a depth of 15 meters from the Mediterranean Sea.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4852384866711434malatequinone oxidoreductaseQuickGO ontologyBLASTP
4866934883691677MFS superfamily sulfate permeaseQuickGO ontologyBLASTP
4884474895831137glycerol dehydrogenaseQuickGO ontologyBLASTP
4896544914681815GTP-binding protein LepAQuickGO ontologyBLASTP
491496491693198hypothetical protein
491699492094396hypothetical protein
492081492554474pili subunit superfamily proteinQuickGO ontologyBLASTP
492526492804279hypothetical protein
4928114943701560hypothetical proteinBLASTP
494504495127624pili subunit superfamily proteinQuickGO ontologyBLASTP
495291495632342pili subunit superfamily proteinQuickGO ontologyBLASTP
4957454974811737hypothetical proteinBLASTP
497417497902486pili subunit superfamily proteinQuickGO ontologyBLASTP
497989498504516pili subunit superfamily proteinQuickGO ontologyBLASTP
498658499380723two-component system response regulatorQuickGO ontologyBLASTP
499459499854396PAS domain-containing proteinQuickGO ontologyBLASTP
4998515009421092two-component system sensor histidine kinaseQuickGO ontologyBLASTP
500924501292369two-component response transcriptional regulatorQuickGO ontologyBLASTP
501418502002585pili subunit superfamily proteinQuickGO ontologyBLASTP
5020775043592283Type II secretory pathway component PulDQuickGO ontologyBLASTP
504385505257873dipeptideoligopeptidenickel ABC transporter permeaseQuickGO ontologyBLASTP
5051615071071947glycosyl transferase family proteinQuickGO ontologyBLASTP
507135507407273hypothetical protein
507417508106690tRNA guanosine-2-O--methyltransferaseQuickGO ontologyBLASTP
508110508460351methylated-DNA--protein-cysteine methyltransferaseQuickGO ontologyBLASTP
5083905097541365ribosomal RNA small subunit methyltransferase BQuickGO ontologyBLASTP
509738510343606hypothetical proteinBLASTP
5103405124392100glycosyltransferaseQuickGO ontologyBLASTP