Pre_GI Gene

Host: NC_009482:619467 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009482:619467 Synechococcus sp. RCC307 chromosome, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Marine Synechococcus and Prochlorococcus are the most abundant photosynthetic organisms on earth and between them account for about half of the world's photosynthesis. RCC307 is an oceanic Synechococcus strain which presents great phylogenetic interest because trees obtained using its 16S RNA gene seem to indicate that it is rooted at the base of the radiation of marine cyanobacteria. This strain was isolated from seawater taken at a depth of 15 meters from the Mediterranean Sea.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6187796194807022-C-methyl-D-erythritol 4-phosphate cytidylyltransferaseQuickGO ontologyBLASTP
619467620315849hypothetical proteinBLASTP
620312621211900prenyltransferaseQuickGO ontologyBLASTP
6212376229221686exopolyphosphataseQuickGO ontologyBLASTP
622873623700828hypothetical protein
623692623862171hypothetical protein
623841624011171hypothetical protein
6240886254191332Phage integrase family proteinQuickGO ontologyBLASTP
625455625997543hypothetical protein
626365626922558DnaJ domain-containing proteinQuickGO ontologyBLASTP
6269386279691032hypothetical proteinBLASTP
627966628187222hypothetical protein
6283116305182208hexameric replicative helicase RepA-like domain-containing proteinQuickGO ontologyBLASTP
630518630760243hypothetical proteinBLASTP
630735631052318hypothetical protein
6313516323881038hypothetical proteinBLASTP
6325326337461215hypothetical proteinBLASTP
634453635223771precorrin-4 methylaseQuickGO ontologyBLASTP
635220636089870prolipoprotein diacylglyceryl transferaseQuickGO ontologyBLASTP
636094637023930apocytochrome fQuickGO ontology
637070637606537cytochrome b6-f complex iron-sulfur subunitQuickGO ontologyBLASTP
637697638041345hypothetical protein
637992638771780Sec-independent protein secretion pathway component TatCQuickGO ontologyBLASTP
6387686405011734RNA-binding proteinQuickGO ontologyBLASTP
640554641120567guanylate kinaseQuickGO ontologyBLASTP
641192641308117photosystem I reaction center subunit IXQuickGO ontology
641322641798477photosystem I reaction centre PsaF proteinQuickGO ontologyBLASTP
6418386429081071o-sialoglycoprotein endopeptidaseQuickGO ontologyBLASTP