Pre_GI Gene

Host: NC_009515:474285 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009515:474285 Methanobrevibacter smithii ATCC 35061, complete genome

Host Lineage: Methanobrevibacter smithii; Methanobrevibacter; Methanobacteriaceae; Methanobacteriales; Euryarchaeota; Archaea

General Information: Methanobrevibacter smithii ATCC 35061 (DSM 861) (strain PS) was isolated from a sewage digester in Gainesville, Florida, USA. Sewage digester isolate. Human gut methanogen. Methanobrevibacter smithii can be isolated from anoxic environments such as anaerobic digesters, anaerobic soil and sediment, and the gastrointestinal tracts of humans, ruminants and other animals. This organism is the dominant archaeal symbiont found in the human gut.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4742854768852601ATP-dependent helicaseQuickGO ontologyBLASTP
476897477364468flavodoxin FldAQuickGO ontologyBLASTP
477370477738369hypothetical protein
477751478158408hypothetical protein
47816147925210925-formaminoimidazole-4-carboxamide-1-beta-D- ribofuranosyl 5-monophosphate synthetaseQuickGO ontologyBLASTP
479450479989540phosphoesterase YfcEQuickGO ontologyBLASTP
479993480625633cell division protein J 23S rRNA methylase FtsJQuickGO ontologyBLASTP
480622481044423hypothetical proteinBLASTP
4811814831812001ATPaseQuickGO ontologyBLASTP
483287483694408translation initiation factor IF-2 subunit betaQuickGO ontologyBLASTP
4837154847671053NMD3-related protein nonsense mediated mRNA decayQuickGO ontologyBLASTP
484773485732960tyrosyl-tRNA synthetaseQuickGO ontologyBLASTP
485736485945210hypothetical protein
4862394876241386methanolcobalamin methyltransferase MtaBQuickGO ontologyBLASTP
487643488470828corrinoid protein methionine synthase-related MtaCQuickGO ontologyBLASTP
4884774900811605methyltransferase activation protein MapAQuickGO ontologyBLASTP
4900904910941005methylcobalamincoenzyme M methyltransferase MtaAQuickGO ontologyBLASTP
491091491642552hypothetical proteinBLASTP
491647492225579thymidylate kinase TmkQuickGO ontologyBLASTP
4924044938821479hypothetical proteinBLASTP
4941144966272514collagenase peptidase family U32QuickGO ontologyBLASTP
4966144989892376collagenase peptidase family U32QuickGO ontologyBLASTP
4990445009961953DNA mismatch repair ATPase MutSQuickGO ontologyBLASTP