Pre_GI Gene

Host: NC_010001:1745089 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:1745089 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17450891746060972glycosyl hydrolase BNR repeat-containing proteinQuickGO ontology
17465921747128537putative flavoredoxinQuickGO ontologyBLASTP
17472331747550318transcriptional regulator HxlR familyQuickGO ontologyBLASTP
17479401748317378hypothetical protein
17483781748872495hypothetical proteinBLASTP
17488501749191342ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
17493181750049732Methyltransferase type 11QuickGO ontologyBLASTP
17504001751233834transcriptional regulator MerR familyQuickGO ontologyBLASTP
17516841751974291microcompartments proteinQuickGO ontologyBLASTP
175197417529901017membrane spanning proteinQuickGO ontologyBLASTP
17529951753282288hypothetical proteinBLASTP
17533031753599297microcompartments proteinQuickGO ontologyBLASTP
17536171753925309microcompartments proteinQuickGO ontologyBLASTP
175395617554911536aldehyde dehydrogenase family proteinQuickGO ontologyBLASTP
175551917580652547Formate C-acetyltransferaseQuickGO ontologyBLASTP
17580881759035948glycyl-radical enzyme activating protein familyQuickGO ontologyBLASTP
17590531759394342microcompartments proteinQuickGO ontologyBLASTP
17593911759822432GTP-binding protein EutPPduV familyQuickGO ontologyBLASTP
175984517609811137iron-containing alcohol dehydrogenaseQuickGO ontologyBLASTP
17609811761616636hypothetical proteinBLASTP
17615981762443846ethanolamine utilization protein EutJ family proteinQuickGO ontologyBLASTP
17624571762762306microcompartments proteinQuickGO ontologyBLASTP
17627561763019264Ethanolamine utilization protein EutNcarboxysome structural protein CcmlQuickGO ontologyBLASTP
17630351763664630Ethanolamine utilisation EutQ family proteinQuickGO ontologyBLASTP
17636761764362687microcompartments proteinQuickGO ontologyBLASTP
176439317659401548acetaldehyde dehydrogenase acetylatingQuickGO ontologyBLASTP
17659691766604636Propanediol utilization proteinQuickGO ontologyBLASTP
17666481766932285microcompartments proteinQuickGO ontologyBLASTP
17671221767364243hypothetical protein
17675901768153564Isoprenylcysteine carboxyl methyltransferaseQuickGO ontologyBLASTP
17685781769135558hydrolase HAD-superfamily subfamily IIIAQuickGO ontologyBLASTP
17693811769956576protein of unknown function DUF1349QuickGO ontologyBLASTP
177044417715351092Peptidoglycan-binding domain 1 proteinQuickGO ontologyBLASTP
17719081772750843hypothetical protein
17750761775894819hypothetical protein