Pre_GI Gene

Host: NC_010001:3369500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:3369500 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
33696333369899267ribosomal protein S15QuickGO ontologyBLASTP
337008433717481665NaPi-cotransporter II-related proteinQuickGO ontologyBLASTP
337224833736391392transcriptional regulator GntR family with aminotransferase domainQuickGO ontologyBLASTP
33736083374561954riboflavin biosynthesis protein RibFQuickGO ontologyBLASTP
33746893375612924tRNA pseudouridine synthase BQuickGO ontologyBLASTP
33756873376661975phosphoesterase RecJ domain proteinQuickGO ontologyBLASTP
33766733377083411ribosome-binding factor AQuickGO ontologyBLASTP
337723333806283396translation initiation factor IF-2QuickGO ontologyBLASTP
33806723381019348ribosomal protein L7AeL30eS12eGadd45QuickGO ontologyBLASTP
33810123381287276protein of unknown function DUF448QuickGO ontologyBLASTP
338131433823781065NusA antitermination factorQuickGO ontologyBLASTP
33824013382868468protein of unknown function DUF150QuickGO ontologyBLASTP
33830993384076978biotin--acetyl-CoA-carboxylase ligaseQuickGO ontologyBLASTP
33845163384896381RubrerythrinQuickGO ontologyBLASTP
338514933874222274hypothetical proteinBLASTP
338799333893031311phosphoribosyl-ATP diphosphataseQuickGO ontologyBLASTP
33893843390103720phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseQuickGO ontologyBLASTP
33901403390730591Imidazoleglycerol-phosphate dehydrataseQuickGO ontologyBLASTP
339082133921341314Histidinol dehydrogenaseQuickGO ontologyBLASTP
33922003392847648ATP phosphoribosyltransferaseQuickGO ontologyBLASTP
339285733941131257Histidine--tRNA ligaseQuickGO ontologyBLASTP
33942803394816537Recombination protein UQuickGO ontologyBLASTP
339484033958801041pseudouridine synthase RluA familyQuickGO ontologyBLASTP