Pre_GI Gene

Host: NC_010001:4486170 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:4486170 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
44861704486982813cobalt transport proteinQuickGO ontologyBLASTP
44871114487971861ABC transporter relatedQuickGO ontologyBLASTP
44879524488863912ABC transporter relatedQuickGO ontologyBLASTP
44891624489698537ribosomal protein L17QuickGO ontologyBLASTP
44897234490682960DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
44907554491351597RNA-binding S4 domain proteinQuickGO ontologyBLASTP
44913684491766399ribosomal protein S11QuickGO ontologyBLASTP
44918294492197369ribosomal protein S13QuickGO ontologyBLASTP
44927884492901114ribosomal protein L36QuickGO ontologyBLASTP
44930934493311219translation initiation factor IF-1QuickGO ontologyBLASTP
44934074494162756methionine aminopeptidase type IQuickGO ontologyBLASTP
44942684494921654Nucleoside-triphosphate--adenylate kinaseQuickGO ontologyBLASTP
449509344964211329preprotein translocase SecY subunitQuickGO ontologyBLASTP
44964234496863441ribosomal protein L15QuickGO ontologyBLASTP
44968904497072183ribosomal protein L30QuickGO ontologyBLASTP
44970924497598507ribosomal protein S5QuickGO ontologyBLASTP
44976154497983369ribosomal protein L18QuickGO ontologyBLASTP
44980014498543543ribosomal protein L6QuickGO ontologyBLASTP
44987974499198402ribosomal protein S8QuickGO ontologyBLASTP
44992224499392171ribosomal protein S14QuickGO ontologyBLASTP
44994244499963540ribosomal protein L5QuickGO ontologyBLASTP
44999884500305318ribosomal protein L24QuickGO ontologyBLASTP
45003204500688369ribosomal protein L14QuickGO ontologyBLASTP
45007494501006258ribosomal protein S17QuickGO ontologyBLASTP
45010714501280210ribosomal protein L29QuickGO ontologyBLASTP
45012704501707438ribosomal protein L16QuickGO ontologyBLASTP
45017074502366660ribosomal protein S3QuickGO ontologyBLASTP
45023784502764387ribosomal protein L22QuickGO ontologyBLASTP
45029984503276279ribosomal protein S19QuickGO ontologyBLASTP
45032954504140846ribosomal protein L2QuickGO ontologyBLASTP
45043214504620300Ribosomal protein L25L23QuickGO ontologyBLASTP
45046204505240621ribosomal protein L4L1eQuickGO ontologyBLASTP
45052694505904636ribosomal protein L3QuickGO ontologyBLASTP
45060964506413318ribosomal protein S10QuickGO ontologyBLASTP
450727145095592289methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
45101444510467324Cupin 2 conserved barrel domain proteinQuickGO ontologyBLASTP
45106914511566876hypothetical proteinBLASTP
45120494512726678phage shock protein A PspAQuickGO ontologyBLASTP
451278645139821197hypothetical proteinBLASTP
451397945149801002hypothetical protein
451499945160031005YdjIQuickGO ontologyBLASTP
451619045173051116diguanylate cyclaseQuickGO ontologyBLASTP