Pre_GI Gene

Host: NC_010334:1701957 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010334:1701957 Shewanella halifaxensis HAW-EB4, complete genome

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
170195717031891233hydrogenase Fe-onlyQuickGO ontologyBLASTP
17032041703524321iron hydrogenase small subunitQuickGO ontologyBLASTP
17035381704218681formate dehydrogenase putativeQuickGO ontologyBLASTP
170431017057521443biotin and thiamin synthesis associatedQuickGO ontologyBLASTP
17057921706406615hypothetical protein
170641817074401023Radical SAM domain proteinQuickGO ontologyBLASTP
170744217086831242small GTP-binding proteinQuickGO ontologyBLASTP
17097011710696996beta-lactamase domain proteinQuickGO ontologyBLASTP
171068917121551467hypothetical proteinBLASTP
171214217146552514helicase domain proteinQuickGO ontologyBLASTP
171496517160861122hypothetical protein
171679317179621170hypothetical proteinBLASTP
17184191719048630hypothetical proteinBLASTP
17190491719495447protein of unknown function DUF400QuickGO ontologyBLASTP
17201901720615426FlgN family proteinQuickGO ontologyBLASTP
17206911721005315anti-sigma-28 factor FlgMQuickGO ontologyBLASTP
17211531721926774SAF domain proteinQuickGO ontologyBLASTP
17221471723067921response regulator receiver modulated CheW proteinQuickGO ontologyBLASTP
17232081724041834MCP methyltransferase CheR-typeQuickGO ontologyBLASTP
17242171724615399flagellar basal-body rod protein FlgBQuickGO ontologyBLASTP
17246181725034417flagellar basal-body rod protein FlgCQuickGO ontologyBLASTP
17250601725863804flagellar hook capping proteinQuickGO ontologyBLASTP
172595217273131362flagellar basal body FlaE domain proteinQuickGO ontologyBLASTP