Pre_GI Gene

Host: NC_010473:2839902 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010473:2839902 Escherichia coli str. K-12 substr. DH10B, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28399022840495594heat shock proteinQuickGO ontologyBLASTP
28406182841496879NAD kinaseQuickGO ontologyBLASTP
284158228432431662recombination and repair proteinQuickGO ontologyBLASTP
28433922843733342small membrane lipoproteinQuickGO ontologyBLASTP
28437952844085291hypothetical proteinBLASTP
28440752844551477hypothetical proteinBLASTP
28446832845165483trans-translation proteinQuickGO ontologyBLASTP
2845380284574236310Sa RNA SsrA tmRNAQuickGO ontologyBLASTP
28474312848387957CP4-57 prophage predicted proteinQuickGO ontologyBLASTP
28484312848643213CP4-57 prophage DNA-binding transcriptional activatorQuickGO ontologyBLASTP
284877228501811410CP4-57 prophage predicted proteinQuickGO ontologyBLASTP
28503342850960627CP4-57 prophage predicted proteinQuickGO ontologyBLASTP
285113828533272190CP4-57 prophage conserved proteinQuickGO ontologyBLASTP
285332428549401617CP4-57 prophage predicted proteinQuickGO ontologyBLASTP
28553002855563264CP4-57 prophage predicted proteinQuickGO ontologyBLASTP
285570528567781074CP4-57 prophage RNase LSQuickGO ontologyBLASTP
28567712857142372CP4-57 prophage predicted proteinQuickGO ontologyBLASTP
28574972858360864CP4-57 prophage predicted GTP-binding proteinQuickGO ontologyBLASTP
28584522859273822CP4-57 prophage predicted proteinQuickGO ontologyBLASTP
28594902860191702CP4-57 prophage predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
28602322860468237CP4-57 prophage predicted inner membrane proteinQuickGO ontology
28604682860911444CP4-57 prophage predicted proteinQuickGO ontologyBLASTP
28609352861402468CP4-57 prophage predicted proteinQuickGO ontologyBLASTP
28616272861941315CP4-57 prophage conserved proteinQuickGO ontologyBLASTP
28619542862472519CP4-57 prophage predicted inner membrane proteinQuickGO ontologyBLASTP
28626232862823201CP4-57 prophage predicted proteinQuickGO ontologyBLASTP
286310528648081704CP4-57 prophage predicted inner membrane proteinQuickGO ontologyBLASTP
28657062866164459CP4-57 prophage predicted antirestriction proteinQuickGO ontologyBLASTP
28661732866655483CP4-57 prophage predicted DNA repair proteinQuickGO ontologyBLASTP
28666642866864201hypothetical proteinBLASTP
28669022867219318CP4-57 prophage antitoxin of the YpjF-YfjZ toxin-antitoxin systemQuickGO ontologyBLASTP
28672402867569330CP4-57 prophage toxin of the YpjF-YfjZ toxin-antitoxin systemQuickGO ontologyBLASTP
28728522872995144BLASTP
287342528747981374BLASTP
2875549287562476tRNA-IleQuickGO ontologyBLASTP
287618428784362253BLASTP
28787722879749978hypothetical proteinBLASTP
287976928810371269predicted enzymeQuickGO ontologyBLASTP
2882522288380212814-aminobutyrate aminotransferase PLP-dependentQuickGO ontologyBLASTP
288404028854401401gamma-aminobutyrate transporterQuickGO ontologyBLASTP
28854612886123663DNA-binding transcriptional dual regulatorQuickGO ontologyBLASTP
28861242886573450hypothetical proteinBLASTP
28866572886815159predicted membrane proteinQuickGO ontologyBLASTP
28869982887297300predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
28873072887831525predicted inner membrane protein with hydrolase activityQuickGO ontologyBLASTP
28878782888282405DNA binding protein nucleoid-associatedQuickGO ontologyBLASTP
28889512889400450predicted inner membrane proteinQuickGO ontologyBLASTP
28894372889781345hypothetical proteinBLASTP