Pre_GI Gene

Host: NC_010473:3883701 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010473:3883701 Escherichia coli str. K-12 substr. DH10B, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38837013884660960predicted polysaccharide deacetylaseQuickGO ontologyBLASTP
388464738856811035predicted glycosyl transferaseQuickGO ontologyBLASTP
388592038869451026threonine 3-dehydrogenase NADP-bindingQuickGO ontologyBLASTP
388695538881511197glycine C-acetyltransferaseQuickGO ontologyBLASTP
38884263889283858hypothetical proteinBLASTP
38895873890519933ADP-L-glycero-D-mannoheptose-6-epimerase NADP-bindingQuickGO ontologyBLASTP
389052938915751047ADP-heptoseLPS heptosyltransferase IIQuickGO ontologyBLASTP
38915793892538960ADP-heptoseLPS heptosyl transferase IQuickGO ontologyBLASTP
389254838938071260O-antigen ligaseQuickGO ontologyBLASTP
389383938949121074lipopolysaccharide core biosynthesisQuickGO ontologyBLASTP
38949453895796852lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
38958673896565699lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
389658338975991017UDP-D-glucosegalactosyllipopolysaccharide glucosyltransferaseQuickGO ontologyBLASTP
389763938986581020UDP-D-galactoseglucosyllipopolysaccharide- alpha-13-D-galactosyltransferaseQuickGO ontologyBLASTP
389865838997671110UDP-D-galactoseglucosyllipopolysaccharide-1 6-D-galactosyltransferaseQuickGO ontologyBLASTP
38997813900716936lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
39007533901550798kinase that phosphorylates core heptose of lipopolysaccharideQuickGO ontologyBLASTP
390154339026671125glucosyltransferase IQuickGO ontologyBLASTP
390266439036981035lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
3904140390541712783-deoxy-D-manno-octulosonic-acid transferase KDO transferaseQuickGO ontologyBLASTP
39054253905904480pantetheine-phosphate adenylyltransferaseQuickGO ontologyBLASTP
39059433906752810formamidopyrimidine5-formyluracil 5-hydroxymethyluracil DNA glycosylaseQuickGO ontologyBLASTP
3906850390701716850S ribosomal subunit protein L33QuickGO ontologyBLASTP
3907038390727423750S ribosomal subunit protein L28QuickGO ontologyBLASTP
39074913908159669protein associated with replication fork possible DNA repair proteinQuickGO ontologyBLASTP
390833139095511221fused 4-phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine synthetase FMN-bindingQuickGO ontologyBLASTP
39095323909987456deoxyuridinetriphosphataseQuickGO ontologyBLASTP
39100943910690597division inhibitorQuickGO ontologyBLASTP
39107273911368642orotate phosphoribosyltransferaseQuickGO ontologyBLASTP