Pre_GI Gene

Host: NC_010498:1117938 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:1117938 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
111793811193321395major facilitator family transporterQuickGO ontologyBLASTP
111943711204681032periplasmic sugar binding transcriptional regulatorQuickGO ontologyBLASTP
112042811214621035inosine-uridine preferring nucleoside hydrolaseQuickGO ontologyBLASTP
11215261122239714mgtC family proteinQuickGO ontologyBLASTP
11223961122995600BLASTP
11230501123769720BLASTP
11239911124533543BLASTP
11252541125532279hypothetical proteinBLASTP
112587011269011032asparaginase family proteinQuickGO ontologyBLASTP
11272281127871644BLASTP
11282791128464186hypothetical proteinBLASTP
112851711298781362anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
112987511311311257peptidase TQuickGO ontologyBLASTP
113199711333971401putative aspartate ammonia-lyaseQuickGO ontologyBLASTP
113355311348871335anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
113537511364211047L-asparaginase 2QuickGO ontologyBLASTP
11370151137740726response regulatorQuickGO ontologyBLASTP
11387191139375657GntR family transcriptional regulatorQuickGO ontologyBLASTP
113953011408461317anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
114096211422781317anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
114234311437191377argininosuccinate lyase ArgH-like proteinQuickGO ontologyBLASTP
11443781144767390hypothetical proteinBLASTP
114515311463851233immunoglobulin-binding regulator A-like proteinQuickGO ontologyBLASTP
11463701147014645BLASTP
11472691147385117hypothetical proteinBLASTP
114738511495312147BLASTP