Pre_GI Gene

Host: NC_010501:3013103 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:3013103 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
301310330150641962acetoacetyl-CoA synthaseQuickGO ontologyBLASTP
30151013015376276PpiC-type peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
30153863016009624Lysine exporter protein LYSEYGGAQuickGO ontologyBLASTP
30161413016962822transcriptional regulator AraC familyQuickGO ontologyBLASTP
30170503017664615Lysine exporter protein LYSEYGGAQuickGO ontologyBLASTP
30176453018337693metallophosphoesteraseQuickGO ontologyBLASTP
30185793019322744Nitrilasecyanide hydratase and apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
30193193019561243hypothetical proteinBLASTP
30196033020103501methylated-DNA--protein-cysteine methyltransferaseQuickGO ontologyBLASTP
30201893020977789lipopolysaccharide core biosynthesis domain proteinQuickGO ontologyBLASTP
30211753021372198hypothetical protein
30214063021774369hypothetical protein
30218443022221378hypothetical proteinBLASTP
30224133022709297hypothetical proteinBLASTP
30232113023513303hypothetical proteinBLASTP
30239023024663762short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
30247333025197465transcriptional regulator AraC familyQuickGO ontologyBLASTP
30255023026239738short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
30265613027469909transcriptional regulator AraC familyQuickGO ontologyBLASTP
30276343027795162hypothetical proteinBLASTP
302779230293511560hypothetical proteinBLASTP
30294653029734270PaaRQuickGO ontologyBLASTP
302973130314191689hypothetical proteinBLASTP
303141630334402025hypothetical proteinBLASTP
303343730359922556type VI secretion system Vgr family proteinQuickGO ontologyBLASTP