Pre_GI Gene

Host: NC_010501:3448389 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:3448389 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
344838934495701182hypothetical proteinBLASTP
344962034510081389major facilitator superfamily MFS_1QuickGO ontologyBLASTP
345104034528271788Dihydroxy-acid dehydrataseQuickGO ontologyBLASTP
34530213453491471transcriptional regulator MarR familyQuickGO ontologyBLASTP
34537783454731954ferredoxinQuickGO ontologyBLASTP
345476834558441077Vanillate monooxygenaseQuickGO ontologyBLASTP
345615134574851335major facilitator superfamily MFS_1QuickGO ontologyBLASTP
345752034587941275outer membrane porinQuickGO ontologyBLASTP
34594863459728243hypothetical proteinBLASTP
34598733460136264hypothetical proteinBLASTP
346137434627081335hypothetical protein
34630423463947906transcriptional regulator LysR familyQuickGO ontologyBLASTP
34641393464516378protein of unknown function DUF1486QuickGO ontologyBLASTP
34646493465410762short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
34654903466047558flavin reductase domain protein FMN-bindingQuickGO ontologyBLASTP
34660653466964900transcriptional regulator AraC familyQuickGO ontologyBLASTP
34671733467427255hypothetical proteinBLASTP
34674553468192738short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
34684883468919432DoxX family proteinQuickGO ontologyBLASTP
34689783469901924Alcohol dehydrogenase zinc-binding domain proteinQuickGO ontologyBLASTP
34701503470512363hypothetical proteinBLASTP
34706483471556909transcriptional regulator AraC familyQuickGO ontologyBLASTP
347205234731851134serine-pyruvate transaminaseQuickGO ontologyBLASTP
34732463474106861SCP-like extracellularQuickGO ontologyBLASTP
347439234754291038diguanylate cyclase with GAF sensorQuickGO ontologyBLASTP
347557834769631386amidohydrolaseQuickGO ontologyBLASTP
347700134783741374xanthine permeaseQuickGO ontologyBLASTP