Pre_GI Gene

Host: NC_010552 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010552:293703 Burkholderia ambifaria MC40-6 chromosome 2, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2937032951691467Aldehyde dehydrogenase NADQuickGO ontologyBLASTP
2951772962441068iron-containing alcohol dehydrogenaseQuickGO ontologyBLASTP
296273297145873intradiol ring-cleavage dioxygenaseQuickGO ontologyBLASTP
297151297462312YCII-relatedQuickGO ontologyBLASTP
297466297801336Rieske 2Fe-2S domain proteinQuickGO ontologyBLASTP
2980362991241089porin Gram-negative typeQuickGO ontologyBLASTP
299203299862660Glutathione S-transferase domainQuickGO ontologyBLASTP
299983300798816transcriptional regulator AraC familyQuickGO ontologyBLASTP
301061301873813hypothetical proteinBLASTP
301941302270330hypothetical protein
3026043038631260hypothetical proteinBLASTP
303860304351492hypothetical proteinBLASTP
3043543063602007hypothetical proteinBLASTP
3072123112674056hypothetical proteinBLASTP
3113293135692241heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
314035314697663LemA family proteinQuickGO ontologyBLASTP
314715315548834protein of unknown function DUF477QuickGO ontologyBLASTP
315551316048498protein of unknown function DUF477QuickGO ontologyBLASTP
3161493179781830glucosamine--fructose-6-phosphate aminotransferase isomerizingQuickGO ontologyBLASTP
318135318626492transcriptional regulator AsnC familyQuickGO ontologyBLASTP
3186563195108553-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
319588320406819transcriptional regulator AraC familyQuickGO ontologyBLASTP
320420320953534methylated-DNA--protein-cysteine methyltransferaseQuickGO ontologyBLASTP
3209503224251476transcriptional regulator AraC familyQuickGO ontologyBLASTP