Pre_GI Gene

Host: NC_010581:561579 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010581:561579 Beijerinckia indica subsp. indica ATCC 9039, complete genome

Host Lineage: Beijerinckia indica; Beijerinckia; Beijerinckiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: It produces a water-soluble extracellular polysaccharide that forms a biopolymer useful for a wide range of applications to textile printing, oil and adhesive industries. This organism belongs to the Beijerinckiaceae family, which includes both methanotrophic (bacteria able to oxidize methane) and nonmethanotrophic species (like Beijerinckia indica subsp. indica). Sequencing of strains from this family presents an ideal opportunity for a comparative genomic study into the evolution and biochemistry of obligate methanotrophy.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
561579562400822NADH ubiquinone oxidoreductase 20 kDa subunitQuickGO ontologyBLASTP
5623755636641290nickel-dependent hydrogenase large subunitQuickGO ontologyBLASTP
563661564203543hydrogenase maturation proteaseQuickGO ontologyBLASTP
564262564423162BLASTP
564495565073579protein of unknown function DUF1058QuickGO ontologyBLASTP
565360566355996Glyoxylate reductaseQuickGO ontologyBLASTP
566414566914501heat shock protein Hsp20QuickGO ontologyBLASTP
567022567288267protein of unknown function DUF1150QuickGO ontology
567399567851453aspartate 1-decarboxylaseQuickGO ontologyBLASTP
5682075693641158methyltransferase FkbM familyQuickGO ontologyBLASTP
5694935712711779hypothetical proteinBLASTP
5712995723181020hypothetical proteinBLASTP
5724035734281026glycosyl transferase family 2QuickGO ontologyBLASTP
573425574126702hypothetical protein
5741195756181500glycosyl transferase group 1QuickGO ontologyBLASTP
576054576551498peptide deformylaseQuickGO ontologyBLASTP
5766255776561032D-isomer specific 2-hydroxyacid dehydrogenase NAD-bindingQuickGO ontologyBLASTP
5776935789161224Acyl-CoA dehydrogenase type 2 domainQuickGO ontologyBLASTP
5789225799471026ABC transporter periplasmic substrate-binding protein aliphatic sulfonates family putativeQuickGO ontologyBLASTP
580129581079951transcriptional regulator LysR familyQuickGO ontologyBLASTP
581203582177975aliphatic sulfonates family ABC transporter periplsmic ligand-binding proteinQuickGO ontologyBLASTP
582308582775468protein TolRQuickGO ontologyBLASTP
582756583496741MotATolQExbB proton channelQuickGO ontologyBLASTP
583637584464828TonB family proteinQuickGO ontology