Pre_GI Gene

Host: NC_010688:1192410 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010688:1192410 Xanthomonas campestris pv. campestris, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11924101193195786tRNA guanine-N7--methyltransferaseQuickGO ontologyBLASTP
11933411194135795thiazole biosynthesis proteinQuickGO ontologyBLASTP
11941841194384201thiamin S sulphur transfer proteinQuickGO ontologyBLASTP
119454111963581818autotransporter carboxylic ester hydrolaseQuickGO ontologyBLASTP
119662211981871566phage-related integraseQuickGO ontologyBLASTP
11985281198968441hypothetical proteinBLASTP
11989611199506546hypothetical proteinBLASTP
11997521200111360hypothetical proteinBLASTP
12001291200443315hypothetical proteinBLASTP
12004841201245762hypothetical proteinBLASTP
12013471201685339putative transcriptional regulatorQuickGO ontologyBLASTP
120169512028761182hypothetical proteinBLASTP
120288612041631278hypothetical proteinBLASTP
12043891204670282hypothetical protein
12046801205288609hypothetical protein
120540412068521449phage-related integraseQuickGO ontologyBLASTP
12079991208814816hypothetical proteinBLASTP
12088661209348483hypothetical protein
12094331209819387hypothetical protein
12098371210037201hypothetical protein
12100631211037975hypothetical protein
12114311211739309hypothetical proteinBLASTP
12117441212313570hypothetical protein
12122881213184897hypothetical protein
12131841214005822hypothetical protein
12142561214924669hypothetical proteinBLASTP
121497912166851707hypothetical proteinBLASTP
12167011216952252hypothetical protein
12170641217888825hypothetical proteinBLASTP
12178931218372480DNA repair protein radC homologQuickGO ontologyBLASTP
12184411218641201hypothetical proteinBLASTP
12188361219477642hypothetical proteinBLASTP
121951312220982586hypothetical proteinBLASTP
122223212237491518restriction-modification system DNA-methyltransferaseQuickGO ontologyBLASTP
122375212264002649hypothetical proteinBLASTP
12264141226947534hypothetical protein
12269901227487498hypothetical proteinBLASTP
12276201228324705hypothetical proteinBLASTP
12284391229416978hypothetical proteinBLASTP
12294431229799357hypothetical proteinBLASTP
12299331230109177hypothetical protein
12299871230451465hypothetical proteinBLASTP
123057212321581587putative conjugal transfer proteinQuickGO ontologyBLASTP
12321651232560396hypothetical proteinBLASTP
12327811232915135hypothetical protein
12331641233592429hypothetical proteinBLASTP
12338031234087285hypothetical protein
12341021234275174hypothetical proteinBLASTP
12344061234855450hypothetical proteinBLASTP
12349461235338393putative virulence regulatorQuickGO ontologyBLASTP
12354531235833381hypothetical protein
123587212381992328isoamylaseQuickGO ontologyBLASTP
12384651239370906ribosomal protein S6 modification proteinQuickGO ontologyBLASTP
12395931240066474hypothetical proteinBLASTP
12400971240774678two-component system response regulator receiverQuickGO ontologyBLASTP
124076712421011335two-component system sensor histidine kinaseQuickGO ontologyBLASTP
12422441242735492hypothetical proteinBLASTP
12427321243022291putative DNA-binding proteinQuickGO ontologyBLASTP
12430971243498402hypothetical proteinBLASTP
12440301244653624hypothetical proteinBLASTP
12446671245530864Type II secretory pathway prepilin signal peptidaseQuickGO ontologyBLASTP
124553712467961260pilC fimbrial assembly proteinQuickGO ontologyBLASTP
12471481247561414fimbrial protein precursorQuickGO ontologyBLASTP
124763312492911659hypothetical proteinBLASTP
12493021249931630putative integral membrane proteinQuickGO ontologyBLASTP
124992812514271500spermidine synthase-like enzymeQuickGO ontologyBLASTP
125146212531951734Type 4 fimbrial assembly protein pilBQuickGO ontologyBLASTP
125361212550061395two-component system response regulatorQuickGO ontologyBLASTP
125521512568251611two-component system sensory histidine kinaseQuickGO ontologyBLASTP
125705912582281170succinate-CoA ligase ADP-forming beta subunitQuickGO ontologyBLASTP
12582531259128876succinate-CoA ligase ADP-forming alpha subunitQuickGO ontologyBLASTP
12591481259642495putative DNA-binding proteinQuickGO ontologyBLASTP
12596461259948303putative plasmid stabilization proteinQuickGO ontologyBLASTP
125994512616031659putative bifunctional NAD synthase glutamine-hydrolyzing nitrilaseQuickGO ontologyBLASTP
12615971262580984hypothetical protein