Pre_GI Gene

Host: NC_010803:2067539 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010803:2067539 Chlorobium limicola DSM 245, complete genome

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2067539208054313005Hemolysin-type calcium-binding regionQuickGO ontologyBLASTP
20815482081667120hypothetical protein
208191920829441026metallophosphoesteraseQuickGO ontology
20834332083780348hypothetical protein
20846112085603993NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
208585920870131155hypothetical proteinBLASTP
20870152087779765HpcHHpaI aldolaseQuickGO ontologyBLASTP
20877762088447672cyclase family proteinQuickGO ontologyBLASTP
20884522089129678acylneuraminate cytidylyltransferaseQuickGO ontologyBLASTP
208914220904251284hypothetical proteinBLASTP
20904292090881453hypothetical proteinBLASTP
2090888209195210653-dehydroquinate synthaseQuickGO ontologyBLASTP
20919452092697753short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
20929312093929999oxidoreductase domain proteinQuickGO ontologyBLASTP
20940082094817810D-isomer specific 2-hydroxyacid dehydrogenase NAD-bindingQuickGO ontologyBLASTP
20948892095725837Integrase catalytic regionQuickGO ontologyBLASTP
20959242096265342BLASTP
20963402096957618putative phosphoheptose isomeraseQuickGO ontologyBLASTP
20972532097414162BLASTP
20975362097829294transposase IS3IS911 family proteinQuickGO ontologyBLASTP
20978262098746921Integrase catalytic regionQuickGO ontologyBLASTP
209915221002431092hypothetical proteinBLASTP
21002472101164918D-isomer specific 2-hydroxyacid dehydrogenase NAD-bindingQuickGO ontologyBLASTP
210115721022511095hypothetical proteinBLASTP
210223021035821353hypothetical proteinBLASTP
210401721052311215hypothetical protein
21063242107247924Integrase catalytic regionQuickGO ontologyBLASTP
21072442107537294transposase IS3IS911 family proteinQuickGO ontologyBLASTP
21079792108347369S23 ribosomal proteinQuickGO ontologyBLASTP
210845421096531200glycosyl transferase family 4QuickGO ontologyBLASTP
210968621120732388capsular exopolysaccharide familyQuickGO ontologyBLASTP
21121512112726576hypothetical proteinBLASTP
211308621143271242hypothetical proteinBLASTP
21143172114925609hypothetical proteinBLASTP