Pre_GI Gene

Host: NC_011000:2732330 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011000:2732330 Burkholderia cenocepacia J2315 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
27323302732710381hypothetical proteinBLASTP
273284227342631422major facilitator superfamily proteinQuickGO ontologyBLASTP
27342942734848555hypothetical proteinBLASTP
273488027363041425alphaalpha-trehalose-phosphate synthaseQuickGO ontologyBLASTP
27369022737492591putative lipoproteinQuickGO ontologyBLASTP
27374892737983495putative lipoproteinQuickGO ontologyBLASTP
27385172738990474hypothetical proteinBLASTP
27390242739275252hypothetical proteinBLASTP
27393042739591288hypothetical protein
27398422740369528putative lysozymeQuickGO ontologyBLASTP
27404122740834423BLASTP
27409352741081147BLASTP
274164327426711029putative integraseQuickGO ontologyBLASTP
27426682743441774putative IstB-like ATP binding proteinQuickGO ontologyBLASTP
27459682746234267hypothetical proteinBLASTP
274648427476561173putative outer membrane proteinQuickGO ontologyBLASTP
274765327498362184hypothetical proteinBLASTP
27498532750452600hypothetical proteinBLASTP
275044927518221374putative iron-sulphur cluster binding electron transport proteinQuickGO ontologyBLASTP
27518192752550732putative iron-sulphur oxidoreductaseQuickGO ontologyBLASTP
275261927543671749D-lactate dehydrogenaseQuickGO ontologyBLASTP
27547372755648912LysR family regulatory proteinQuickGO ontologyBLASTP
27559522756815864putative NAD-binding dehydrogenaseQuickGO ontologyBLASTP
27571412757803663LysR family regulatory proteinQuickGO ontologyBLASTP
27579272758262336hypothetical proteinBLASTP
27583192758915597putative transport permeaseQuickGO ontologyBLASTP
27589852759767783hypothetical proteinBLASTP
27597962760248453hypothetical proteinBLASTP
27602652761023759hypothetical proteinBLASTP
276190427631631260transposaseQuickGO ontologyBLASTP
276333927645621224hypothetical proteinBLASTP
27653212765806486hypothetical protein
276581027675671758hypothetical proteinBLASTP
276756027689031344hypothetical proteinBLASTP
276891427703921479hypothetical proteinBLASTP
27707682771340573hypothetical proteinBLASTP
27713622771742381hypothetical proteinBLASTP
277178127728841104hypothetical proteinBLASTP
27731302773894765hypothetical proteinBLASTP
27740122774980969hypothetical proteinBLASTP
27752482776243996hypothetical proteinBLASTP
27762552776470216hypothetical proteinBLASTP
27765222777436915hypothetical proteinBLASTP
277743327785601128hypothetical proteinBLASTP
27786262779432807cosnerved hypothetical proteinQuickGO ontologyBLASTP
27795352779834300hypothetical proteinBLASTP
27798362780474639hypothetical proteinBLASTP
27806742780970297hypothetical protein
27811462781697552hypothetical proteinBLASTP
27820092782338330putative DNA-binding proteinQuickGO ontologyBLASTP
278253927845482010putative O-antigen acetylaseQuickGO ontologyBLASTP
278474027864941755putative lipoproteinQuickGO ontologyBLASTP
278681227887671956BLASTP
27887802789571792DsbA-thioredoxin family proteinQuickGO ontologyBLASTP
27901392791041903LysR family regulatory proteinQuickGO ontologyBLASTP
27915612791929369hypothetical proteinBLASTP
27921322793088957AraC family regulatory proteinQuickGO ontologyBLASTP
279336427945301167major facilitator superfamily proteinQuickGO ontologyBLASTP
27949602795154195BLASTP
27952392795604366MerR family regulatory proteinQuickGO ontologyBLASTP
27956942796602909putative hydrolaseQuickGO ontologyBLASTP
27966252797563939putative hydrolaseQuickGO ontologyBLASTP
27978702798769900LysR family regulatory proteinQuickGO ontologyBLASTP
27988692799261393hypothetical protein
27993032799473171hypothetical protein
27995042799716213hypothetical proteinBLASTP
28004842800747264transposaseQuickGO ontologyBLASTP
28007412801604864BLASTP