Pre_GI Gene

Host: NC_011000:3362382 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011000:3362382 Burkholderia cenocepacia J2315 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
336238233637041323major facilitator superfamily proteinQuickGO ontologyBLASTP
33638873364831945putative nitrogen assimilation regulatory protein NacQuickGO ontologyBLASTP
33648863365512627LysE type translocatorQuickGO ontologyBLASTP
336550933666901182hypothetical proteinBLASTP
33670183367362345hypothetical proteinBLASTP
33674523368369918BLASTP
336896733707271761putative integraseQuickGO ontologyBLASTP
33707583370985228putative DNA-binding proteinQuickGO ontologyBLASTP
33711033371567465hypothetical protein
33716133371915303putative lipoproteinQuickGO ontologyBLASTP
33723133373218906hypothetical proteinBLASTP
33732233373609387hypothetical proteinBLASTP
33735813374069489hypothetical proteinBLASTP
33742013374914714putative phage resolvaserecombinase for integration and excisionQuickGO ontologyBLASTP
33752273375595369hypothetical protein
33759353376414480putative guaninecytidine deaminaseQuickGO ontologyBLASTP
33764253376760336putative transthyretin-like proteinQuickGO ontologyBLASTP
33768083377329522transthyretin-like proteinQuickGO ontologyBLASTP
337733233786721341major facilitator superfamily proteinQuickGO ontologyBLASTP
33790313379969939LysR family regulatory proteinQuickGO ontologyBLASTP
33801193380646528hypothetical proteinBLASTP
33809903381766777tRNA guanine-N7--methyltransferaseQuickGO ontologyBLASTP