Pre_GI Gene

Host: NC_011000:3493575 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011000:3493575 Burkholderia cenocepacia J2315 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
349357534948221248serine hydroxymethyltransferaseQuickGO ontologyBLASTP
34952413495987747putative short-chain dehydrogenaseQuickGO ontologyBLASTP
34960893496574486putative thioesteraseQuickGO ontologyBLASTP
34967193497396678putative TolQ transport transmembrane proteinQuickGO ontologyBLASTP
34974073497856450putative TolR-related proteinQuickGO ontologyBLASTP
349785334988931041possible TolA-related transport transmembrane proteinQuickGO ontologyBLASTP
349900335002981296translocation protein TolBQuickGO ontologyBLASTP
35003163500828513putative OmpA family lipoproteinQuickGO ontologyBLASTP
35008483501597750hypothetical proteinBLASTP
35020253502345321putative phage-related regulatorQuickGO ontologyBLASTP
35024843502879396hypothetical proteinBLASTP
35029473503399453hypothetical proteinBLASTP
350366735046861020putative transposaseQuickGO ontologyBLASTP
35049733505185213hypothetical proteinBLASTP
35051823505505324hypothetical proteinBLASTP
35058253506349525hypothetical proteinBLASTP
350635135073761026hypothetical proteinBLASTP
35074993507942444hypothetical proteinBLASTP
35080463508993948AraC family regulatory proteinQuickGO ontologyBLASTP
35091233509452330carboxymuconolactone decarboxylase family proteinQuickGO ontologyBLASTP
35096533510486834family C44 cysteine peptidaseQuickGO ontologyBLASTP
35106853511248564adenylyl-sulfate kinaseQuickGO ontologyBLASTP
35113593512033675putative acetyltransferase proteinQuickGO ontologyBLASTP
351203035133581329putative acyl-CoA transferaseQuickGO ontologyBLASTP
35134243514341918UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
351433835219877650capsular polysaccharide biosynthesis fatty acid synthaseQuickGO ontologyBLASTP