Pre_GI Gene

Host: NC_011001:163813 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011001:163813 Burkholderia cenocepacia J2315 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1638131649401128DnaJ domain-containing proteinQuickGO ontologyBLASTP
165048165374327hypothetical proteinBLASTP
1658901682742385DNA polymerase IIQuickGO ontologyBLASTP
168376169134759hypothetical protein
1696261724722847hypothetical proteinBLASTP
1724761745272052putative phospholipase D proteinQuickGO ontologyBLASTP
1745311758381308putative lipoproteinQuickGO ontologyBLASTP
175913176050138
176050176448399BLASTP
1764521777621311putative lipoproteinQuickGO ontologyBLASTP
17827017928910202-keto-3-deoxygluconate permeaseQuickGO ontologyBLASTP
1795711804078375-keto-4-deoxyuronate isomeraseQuickGO ontologyBLASTP
1804121812188072-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
181278182174897transcriptional regulator KdgRQuickGO ontologyBLASTP
182234182611378hypothetical proteinBLASTP
1826301841411512putative diguanylate phosphodiesteraseQuickGO ontologyBLASTP
184660184956297hypothetical proteinBLASTP
184977185282306hypothetical proteinBLASTP
1853691864151047AraC family regulatory proteinQuickGO ontologyBLASTP
186525187442918hypothetical proteinBLASTP
187493187867375putative microcin immunity proteinQuickGO ontologyBLASTP
1880511896791629putative lipoproteinQuickGO ontologyBLASTP