Pre_GI Gene

Host: NC_011001:63986 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011001:63986 Burkholderia cenocepacia J2315 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
63986646426573-oxoadipate CoA-transferase subunit BQuickGO ontologyBLASTP
647316608913593-carboxy-ciscis-muconate cycloisomeraseQuickGO ontologyBLASTP
6610666891786putative 3-oxoadipate enol-lactonase IQuickGO ontologyBLASTP
66902672883874-carboxymuconolactone decarboxylaseQuickGO ontologyBLASTP
67483688411359putative 4-hydroxybenzoate transporterQuickGO ontologyBLASTP
6897469222249hypothetical proteinBLASTP
6933169948618putative transporter-LysE familyQuickGO ontologyBLASTP
7049170733243BLASTP
71131731101980putative lipoproteinQuickGO ontologyBLASTP
7311273825714putative short chain dehydrogenaseQuickGO ontologyBLASTP
73803752091407major facilitator superfamily proteinQuickGO ontologyBLASTP
75236769181683hypothetical proteinBLASTP
7694077818879putative hydrolaseQuickGO ontology
77811789891179putative mandelate racemasemuconate lactonizing enzymeQuickGO ontologyBLASTP
78956807341779putative thiamine pyrophosphate enzymeQuickGO ontologyBLASTP
8078381664882hypothetical proteinBLASTP
81873830001128hypothetical proteinBLASTP
8300783588582TetR family regulatory proteinQuickGO ontologyBLASTP
8402284789768TetR family regulatory proteinQuickGO ontologyBLASTP
84902866141713putative flavoprotein monooxygenaseQuickGO ontologyBLASTP
86622876921071putative dioxygenaseQuickGO ontologyBLASTP
8772988685957putative fumarylacetoacetate hydrolase family proteinQuickGO ontologyBLASTP
88682906431962AMP-binding domain-containing proteinQuickGO ontologyBLASTP
9085791582726putative outer membrane protein-OmpW familyQuickGO ontologyBLASTP
9185892592735putative polysaccharide deacetylaseQuickGO ontologyBLASTP
9261693182567hypothetical protein
93173943271155putative glycosyl transferaseQuickGO ontologyBLASTP