Pre_GI Gene

Host: NC_011004:4073916 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011004:4073916 Rhodopseudomonas palustris TIE-1, complete genome

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
40739164074260345hypothetical protein
40742574074742486VRR-NUC domain proteinQuickGO ontology
40747424075620879metallophosphoesteraseQuickGO ontologyBLASTP
40756104075975366hypothetical protein
40761224076439318hypothetical protein
40764114076917507hypothetical protein
40770354077343309hypothetical protein
40773274077614288hypothetical protein
40776144078201588hypothetical protein
40781854078844660hypothetical protein
407939640820802685type III restriction protein res subunitQuickGO ontologyBLASTP
408208040837801701Site-specific DNA-methyltransferase adenine-specificQuickGO ontologyBLASTP
408377740866622886SNF2-related proteinQuickGO ontologyBLASTP
40867884087240453hypothetical proteinBLASTP
40878044088181378hypothetical proteinBLASTP
40881924088641450hypothetical proteinBLASTP
40886414089381741protein of unknown function DUF159QuickGO ontologyBLASTP
408935340905911239DNA-directed DNA polymeraseQuickGO ontologyBLASTP
40911744091731558hypothetical proteinBLASTP
409209140946132523hypothetical protein
40949734095419447hypothetical proteinBLASTP
409550240975262025AAA ATPase central domain proteinQuickGO ontologyBLASTP
40975384097846309hypothetical proteinBLASTP
40978494098031183hypothetical protein
40987484099521774alphabeta hydrolase foldQuickGO ontologyBLASTP
41001634100795633integrase family proteinQuickGO ontologyBLASTP
41017414102538798transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
41025914103547957signal transduction histidine kinaseQuickGO ontologyBLASTP
41035974104112516hypothetical proteinBLASTP
41043414104514174protein of unknown function DUF1328QuickGO ontology
410465141059551305hypothetical proteinBLASTP
410621841074711254sodiumhydrogen exchangerQuickGO ontologyBLASTP
41075874108438852cation diffusion facilitator family transporterQuickGO ontologyBLASTP
410856641109682403membrane-bound PQQ-dependent dehydrogenase glucosequinateshikimate familyQuickGO ontologyBLASTP
41109724111724753ABC transporter relatedQuickGO ontologyBLASTP
41117214112491771ABC transporter relatedQuickGO ontologyBLASTP
411248841137081221inner-membrane translocatorQuickGO ontologyBLASTP
411371341147201008inner-membrane translocatorQuickGO ontologyBLASTP
411494641162981353branched-chain amino acid ABC transporter periplasmic binding protein putativeQuickGO ontologyBLASTP
41169314117440510PRC-barrel domain proteinQuickGO ontologyBLASTP