Pre_GI Gene

Host: NC_011083:3915500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011083:3915500 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
391589239169171026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
3916927391812311972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
39183263919258933ADP-glyceromanno-heptose 6-epimeraseQuickGO ontologyBLASTP
391926139203071047lipopolysaccharide heptosyltransferase IIQuickGO ontologyBLASTP
39203073921260954lipopolysaccharide heptosyltransferase IQuickGO ontologyBLASTP
392130039225141215O-antigen ligaseQuickGO ontologyBLASTP
392257139237161146lipopolysaccharide 12-N-acetylglucosaminetransferaseQuickGO ontologyBLASTP
39238173924626810lipopolysaccharide core biosynthesis protein RfaZQuickGO ontologyBLASTP
39247763925474699lipopolysaccharide core biosynthesis protein RfaYQuickGO ontologyBLASTP
392549739265071011lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
392652539275381014lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
392754439286231080lipopolysaccharide 16-galactosyltransferaseQuickGO ontologyBLASTP
39286933928902210hypothetical proteinBLASTP
39289583929755798lipopolysaccharide core biosynthesis protein RfaPQuickGO ontologyBLASTP
392974839308721125lipopolysaccharide core biosynthesis protein RfaGQuickGO ontologyBLASTP
393086939319391071putative lipopolysaccharide heptosyltransferase IIIQuickGO ontologyBLASTP
39320493932168120hypothetical proteinBLASTP
3932348393362512783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
39336343934113480pantetheine-phosphate adenylyltransferaseQuickGO ontologyBLASTP
39341413934950810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
39350483935215168ribosomal protein L33QuickGO ontologyBLASTP
39352363935472237ribosomal protein L28QuickGO ontologyBLASTP
39356903936355666DNA repair protein RadCQuickGO ontologyBLASTP
393652839377511224BLASTP
39377293938187459dUTP diphosphataseQuickGO ontologyBLASTP
39382953938891597transcriptional regulator domain protein TetR familyQuickGO ontologyBLASTP
39389693939610642orotate phosphoribosyltransferaseQuickGO ontologyBLASTP