Pre_GI Gene

Host: NC_011149:1035990 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011149:1035990 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
103599010380442055helicase IVQuickGO ontologyBLASTP
10380801038538459methylglyoxal synthaseQuickGO ontologyBLASTP
10386331039295663hypothetical proteinBLASTP
10394661039882417BLASTP
10399271040244318hemimethylated DNA-binding proteinQuickGO ontologyBLASTP
104030210415131212protein YccWQuickGO ontologyBLASTP
10417281042276549hypothetical proteinBLASTP
10422931043081789bacterial regulatory proteinQuickGO ontologyBLASTP
10431301043411282acylphosphataseQuickGO ontologyBLASTP
10434081043737330sulfurtransferase TusEQuickGO ontologyBLASTP
10438241044483660inner membrane protein YccAQuickGO ontologyBLASTP
10445491044698150hypothetical proteinBLASTP
1044877104496690tRNA-SerQuickGO ontologyBLASTP
10451021045605504pathogenicity island-encoded protein AQuickGO ontologyBLASTP
10460051046880876secreted effector proteinQuickGO ontologyBLASTP
10473181047452135hypothetical protein
10478631048204342chaperone protein SigEQuickGO ontologyBLASTP
104822110499061686inositol phosphate phosphatase SopBQuickGO ontologyBLASTP
10502691050409141hypothetical proteinBLASTP
10504411050626186hypothetical proteinBLASTP
105062910521911563peptidase family C69QuickGO ontologyBLASTP
105227010536341365heavy metal sensor kinase subfamilyQuickGO ontologyBLASTP
10536271054307681transcriptional activator protein IrlRQuickGO ontologyBLASTP
10544431054853411hydroxyisourate hydrolaseQuickGO ontologyBLASTP
105518610556985134-hydroxyphenylacetate 3-monooxygenase reductase componentQuickGO ontologyBLASTP
1055716105727815634-hydroxyphenylacetate 3-monooxygenase oxygenase componentQuickGO ontologyBLASTP
10574961057936441homoprotocatechuate degradation operon regulator HpaRQuickGO ontologyBLASTP
1058211105950012904-hydroxyphenylacetate degradation bifunctionalisomerasedecarboxylaseQuickGO ontologyBLASTP
1059497106096314675-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseQuickGO ontologyBLASTP