Pre_GI Gene

Host: NC_011149:2912219 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011149:2912219 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
291221929142972079formate hydrogenlyase transcriptional activatorQuickGO ontologyBLASTP
29143592914703345hypothetical proteinBLASTP
29148852915802918periplasmic chelated iron-binding protein YfeAQuickGO ontologyBLASTP
29157992916620822chelated iron transport system membrane protein YfeBQuickGO ontologyBLASTP
29166172917477861chelated iron transport system membrane protein YfeCQuickGO ontologyBLASTP
29174682918316849chelated iron transport system membrane protein YfeDQuickGO ontologyBLASTP
29184152919281867secreted effector proteinQuickGO ontologyBLASTP
29194842920239756transcriptional regulatorQuickGO ontologyBLASTP
29206242921511888transcriptional regulator AraC familyQuickGO ontologyBLASTP
29218572922219363hypothetical proteinBLASTP
29223252922996672BLASTP
29229532923531579type III secretion apparatus protein OrgAMxiKQuickGO ontologyBLASTP
29235242924282759type III secretion apparatus lipoprotein YscJHrcJ familyQuickGO ontologyBLASTP
29242792924521243protein PrgJQuickGO ontologyBLASTP
29246032924845243type III secretion apparatus needle proteinQuickGO ontologyBLASTP
292487029259341065type III secretion apparatus protein PrgHEprHQuickGO ontologyBLASTP
29263642927293930transcriptional regulator HilDQuickGO ontologyBLASTP
292838229300431662transcriptional regulator HilAQuickGO ontologyBLASTP
29300612930543483invasion protein IagBQuickGO ontologyBLASTP
293059729322041608effector protein SptPQuickGO ontologyBLASTP
29322152932607393secretion chaparoneQuickGO ontologyBLASTP
29326342932858225hypothetical proteinBLASTP
29329382933186249acyl carrier proteinQuickGO ontologyBLASTP
293320529352172013cell invasion protein SipAQuickGO ontologyBLASTP
293528129363121032type III effector protein IpaDSipDSspDQuickGO ontologyBLASTP
293638329376121230BLASTP
293764029394211782cell invasion protein SipBQuickGO ontologyBLASTP
29394242939921498type III secretion low calcium response chaperone LcrHSycDQuickGO ontologyBLASTP
294005929411291071type III secretion proteinQuickGO ontologyBLASTP
29411162941907792type III secretion apparatus protein SpaRYscTHrcTQuickGO ontologyBLASTP
29419112942171261EpaQQuickGO ontologyBLASTP
29421972942871675type III secretion apparatus protein YscRHrcR familyQuickGO ontologyBLASTP
29428612943772912type III secretion apparatus protein YscQHrcQ familyQuickGO ontologyBLASTP
294377229447821011antigen presentation protein SpaNQuickGO ontologyBLASTP
29447822945225444surface presentation of antigens protein spaMQuickGO ontologyBLASTP
294520329464981296flagellum-specific ATP synthaseQuickGO ontologyBLASTP
29464952946902408surface presentation of antigens protein SpaKQuickGO ontologyBLASTP
294692629489832058invasion protein InvAQuickGO ontologyBLASTP
294900829501261119invasion protein InvEQuickGO ontologyBLASTP
295012329516671545type III secretion outer membrane pore YscCHrcC familyQuickGO ontologyBLASTP
29518082952557750invasion proteinQuickGO ontologyBLASTP
29529142953357444cell adheranceinvasion proteinQuickGO ontologyBLASTP
29548432955169327putative cytoplasmic proteinQuickGO ontologyBLASTP
29557712956052282putative ABC-type transport systemQuickGO ontologyBLASTP
29560492956576528acetyltransferase gnat familyQuickGO ontologyBLASTP
29566492956789141BLASTP
29572012957857657serinethreonine-protein phosphatase 2QuickGO ontologyBLASTP
29581022958596495hypothetical proteinBLASTP
29586232959291669hypothetical proteinBLASTP
296043529630022568DNA mismatch repair protein MutSQuickGO ontologyBLASTP
29630582963438381putative cytoplasmic proteinQuickGO ontologyBLASTP
296343529646431209major facilitator family transporterQuickGO ontologyBLASTP
29647522965663912transcriptional regulator LysR familyQuickGO ontologyBLASTP
296570529672011497GntPQuickGO ontologyBLASTP
29671982968148951NAD dependent epimerasedehydratase family proteinQuickGO ontologyBLASTP