Pre_GI Gene

Host: NC_011593:2650156 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011593:2650156 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
265015626513461191UDP-galactopyranose mutaseQuickGO ontologyBLASTP
265146326527581296hypothetical proteinBLASTP
26527632653587825binding-protein-dependent transport system inner membrane proteinQuickGO ontologyBLASTP
265358026545811002binding-protein-dependent transport system inner membrane proteinQuickGO ontologyBLASTP
265457826558581281family 1 extracellular solute-binding proteinQuickGO ontologyBLASTP
26561852657126942family 2 glycosyl transferaseQuickGO ontologyBLASTP
265727426584011128hypothetical proteinBLASTP
265840826601111704hypothetical proteinBLASTP
266015226618401689hypothetical proteinBLASTP
266186326649043042glycosyl transferase family proteinQuickGO ontologyBLASTP
266496426662291266ABC transporterQuickGO ontologyBLASTP
26662322667071840ABC-2 type transporterQuickGO ontologyBLASTP
266730026690901791glycosyl transferase family proteinQuickGO ontologyBLASTP
266917026704141245UDP-glucoseGDP-mannose dehydrogenaseQuickGO ontologyBLASTP
267076026717851026dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
267179726730261230acyltransferase 3QuickGO ontologyBLASTP
267302626752692244hypothetical proteinBLASTP
267561126771011491hypothetical proteinBLASTP
26774792678219741ABC transporterQuickGO ontologyBLASTP
26783422679046705metal dependent phosphohydrolaseQuickGO ontologyBLASTP
26790862679946861hypothetical proteinBLASTP
268004026822742235K potassium transporterQuickGO ontologyBLASTP
26826872683646960TatD-related deoxyribonucleaseQuickGO ontologyBLASTP
268385126849961146Esteraselipase-like proteinQuickGO ontologyBLASTP
268500526864471443sugar transporterQuickGO ontologyBLASTP
268668826877071020ROK family proteinQuickGO ontologyBLASTP
26876972688392696N-acetylmannosamine-6-phosphate 2-epimeraseQuickGO ontologyBLASTP
26884312689306876AraC family transcriptional regulatorQuickGO ontologyBLASTP
26894472690154708Fis family transcriptional regulatorQuickGO ontologyBLASTP
26902132690413201BLASTP
269076726918371071filamentation induced by cAMP protein ficQuickGO ontologyBLASTP
269186326936711809ABC transporterQuickGO ontologyBLASTP
269368226955921911ABC transporterQuickGO ontologyBLASTP
269603426974311398ATPaseQuickGO ontologyBLASTP
269754826988641317hypothetical proteinBLASTP
26992172700197981glycoside hydrolase family proteinQuickGO ontologyBLASTP