Pre_GI Gene

Host: NC_011601:4036590 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011601:4036590 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
40356444036603960polysaccharide deacetylaseQuickGO ontologyBLASTP
403659040376241035glycosyl transferase family proteinQuickGO ontologyBLASTP
403786340388881026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
4038898404009411972-amino-3-ketobutyrate CoA ligaseQuickGO ontologyBLASTP
40403084041240933ADP-L-glycero-D-manno-heptose-6-epimeraseQuickGO ontologyBLASTP
404125040422961047ADP-heptose--LPS heptosyltransferaseQuickGO ontologyBLASTP
40423004043259960ADP-heptose--LPS heptosyltransferaseQuickGO ontologyBLASTP
404329340445101218lipid A-core surface polymer ligaseQuickGO ontologyBLASTP
404456440457061143lipopolysaccharide 12-N-acetylglucosamine transferaseQuickGO ontologyBLASTP
40457944046567774lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
40466414047339699lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
404735740483731017UDP-D-glucose galactosyl lipopolysaccharide glucosyltransferaseQuickGO ontologyBLASTP
404841340494321020UDP-D-galactose glucosyl lipopolysaccharide-alpha-13-D-galactosyltransferaseQuickGO ontologyBLASTP
404943240505411110UDP-D-galactoseglucosyllipopolysaccharide-1 6-D-galactosyltransferaseQuickGO ontologyBLASTP
40505554051490936lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
40515274052324798lipopolysaccharide core biosynthesis heptosyl-I-kinaseQuickGO ontologyBLASTP
405231740534411125lipopolysaccharide core biosynthesis glucosyl transferase IQuickGO ontologyBLASTP
405343840544601023lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
4054910405618712783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
40561954056674480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
40567134057522810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
4057620405778716850S ribosomal protein L33QuickGO ontologyBLASTP
4057808405804423750S ribosomal protein L28QuickGO ontologyBLASTP
40582614058929669DNA repair protein RadCQuickGO ontologyBLASTP
405910140603211221bifunctional phosphopantothenoylcysteine decarboxylasephosphopantothenate synthaseQuickGO ontologyBLASTP
40603024060757456deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
40608644061460597nucleoid occlusion proteinQuickGO ontologyBLASTP
40615044062463960RNA-directed DNA polymeraseQuickGO ontologyBLASTP