Pre_GI Gene

Host: NC_011601:4096427 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011601:4096427 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
409642740979801554transcriptional antiterminatorQuickGO ontologyBLASTP
409827541005932319alpha-xylosidaseQuickGO ontologyBLASTP
410060341019851383transporterQuickGO ontologyBLASTP
4102278410236891tRNA-OTHERQuickGO ontologyBLASTP
41032714103891621LEE-encoded effector EspFQuickGO ontologyBLASTP
41039764104254279component of T3SSQuickGO ontologyBLASTP
41042604104481222T3SS structure protein EscFQuickGO ontologyBLASTP
41045184104925408chaperone CesD2QuickGO ontologyBLASTP
41049324105897966translocon EspBQuickGO ontologyBLASTP
410591841070601143translocon EspDQuickGO ontologyBLASTP
41070734107651579translocon EspAQuickGO ontologyBLASTP
410770841087631056secretion switching protein SpeLQuickGO ontologyBLASTP
410890641101261221T3SS structure protein EscDQuickGO ontologyBLASTP
411034341131622820intimin EaeAQuickGO ontologyBLASTP
41132224113692471chaperone CesTQuickGO ontologyBLASTP
411383041154821653translocated intimin receptor TirQuickGO ontologyBLASTP
41158094116420612LEE-encoded effector MapQuickGO ontologyBLASTP
41166954117057363chaperone CesFQuickGO ontologyBLASTP
41172594117765507LEE-encoded effector EspHQuickGO ontologyBLASTP
41177964118713918T3SS structure protein SepQQuickGO ontologyBLASTP
41186764119092417hypothetical proteinBLASTP
41190854119462378hypothetical proteinBLASTP
411946541208051341translocator EscNQuickGO ontologyBLASTP
412078941228162028translocator EscVQuickGO ontologyBLASTP
41228134123166354regulator MpcQuickGO ontologyBLASTP
41233514123647297LEE-encoded effector EspZQuickGO ontologyBLASTP
41236774124105429chaperone of T3SS Rorf8QuickGO ontologyBLASTP
41241084124680573T3SS structure protein EscJQuickGO ontologyBLASTP
41246864125141456secretion switching protein SepDQuickGO ontologyBLASTP
412514141266791539T3SS structure protein EscCQuickGO ontologyBLASTP
41266934127148456chaperone CesDQuickGO ontologyBLASTP
41275324127945414positive regulator GrlAQuickGO ontologyBLASTP
41280014128372372negative regulator GrlRQuickGO ontologyBLASTP
41285684129026459hypothetical proteinBLASTP
412902341300601038secretion system apparatus protein SsaUQuickGO ontologyBLASTP
41300534130829777T3SS structure protein EscTQuickGO ontologyBLASTP
41308294131098270T3SS structure protein EscSQuickGO ontologyBLASTP
41310984131751654type III secretion system proteinQuickGO ontologyBLASTP
41317564132451696component of T3SSQuickGO ontologyBLASTP
41323964132995600component of T3SSQuickGO ontologyBLASTP
41329924133315324component of T3SSQuickGO ontologyBLASTP
41333194133537219component of T3SSQuickGO ontologyBLASTP
41335524133941390transcriptional regulator LerQuickGO ontologyBLASTP
41344454134624180hypothetical protein
413519341363891197LEE-encoded effector EspGQuickGO ontologyBLASTP
41365174137335819hypothetical proteinBLASTP
41377294137890162hypothetical proteinBLASTP
41381064138312207hypothetical proteinBLASTP
41383544139277924hypothetical proteinBLASTP
41392814140099819hypothetical proteinBLASTP
41402554140614360hypothetical proteinBLASTP
414065541418451191ribonucleoside transporterQuickGO ontologyBLASTP
41420564142508453hypothetical proteinBLASTP
414256141438951335xanthineuracil permaseQuickGO ontologyBLASTP
414588541472761392sugar phosphate antiporterQuickGO ontologyBLASTP
414753241488511320regulatory protein UhpCQuickGO ontologyBLASTP
414886141503631503sensory histidine kinase UhpBQuickGO ontologyBLASTP
41503634150953591DNA-binding transcriptional activator UhpAQuickGO ontologyBLASTP