Pre_GI Gene

Host: NC_011898:3973627 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011898:3973627 Clostridium cellulolyticum H10, complete genome

Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39736273974031405hypothetical protein
397412639754151290protein of unknown function DUF815QuickGO ontologyBLASTP
397555039767701221peptidase M14 carboxypeptidase AQuickGO ontologyBLASTP
39768533976957105hypothetical protein
397702839793102283superfamily I DNA helicaseQuickGO ontologyBLASTP
397946239795771165S ribosomal RNAQuickGO ontologyBLASTP
39798283982871304423S ribosomal RNAQuickGO ontologyBLASTP
3983390398346576tRNA-AlaQuickGO ontologyBLASTP
39836433985283164116S ribosomal RNAQuickGO ontologyBLASTP
39859433986554612Methyltransferase type 11QuickGO ontologyBLASTP
39865853987544960D-isomer specific 2-hydroxyacid dehydrogenase NAD-bindingQuickGO ontologyBLASTP
398785839891831326glycoside hydrolase family 4QuickGO ontologyBLASTP
39893373989978642nitroreductaseQuickGO ontologyBLASTP
39900003990797798transcriptional regulator AraC familyQuickGO ontologyBLASTP
399092339922421320xylose isomeraseQuickGO ontologyBLASTP
399230439935031200ROK family proteinQuickGO ontologyBLASTP
399355539950841530xylulokinaseQuickGO ontologyBLASTP
39953803995637258hypothetical proteinBLASTP
3995749399731115632-isopropylmalate synthasehomocitrate synthase family proteinQuickGO ontologyBLASTP
3997446399897215272-isopropylmalate synthaseQuickGO ontologyBLASTP
39991364000131996ketol-acid reductoisomeraseQuickGO ontologyBLASTP
40001994000708510acetolactate synthase small subunitQuickGO ontologyBLASTP
400072740023551629acetolactate synthase large subunit biosynthetic typeQuickGO ontologyBLASTP
400283540043941560glycoside hydrolase family 43QuickGO ontologyBLASTP
40045154004874360hypothetical proteinBLASTP
40049034005361459CMPdCMP deaminase zinc-bindingQuickGO ontologyBLASTP
400557840066151038GDP-mannose 46-dehydrataseQuickGO ontologyBLASTP
40066394007571933NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
40076304008094465DivIVA family proteinQuickGO ontologyBLASTP
40082474009206960hypothetical proteinBLASTP
400919640102571062TPR repeat-containing proteinQuickGO ontologyBLASTP
401024740114401194TPR repeat-containing proteinQuickGO ontologyBLASTP
401155640127461191peptidase S8 and S53 subtilisin kexin sedolisinQuickGO ontologyBLASTP
401283540138871053NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
401390540149451041Transketolase domain proteinQuickGO ontologyBLASTP
40149874015952966dehydrogenase E1 componentQuickGO ontologyBLASTP