Pre_GI Gene

Host: NC_011985:194973 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011985:194973 Agrobacterium radiobacter K84 chromosome 1, complete genome

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
194973195962990phosphoribosylaminoimidazole-succinocarboxamide synthaseQuickGO ontologyBLASTP
196031196711681purinepyrimidine phosphoribosyltransferase proteinQuickGO ontologyBLASTP
196698197534837pseudouridylate synthaseQuickGO ontologyBLASTP
197878198597720two-component response regulator proteinQuickGO ontologyBLASTP
1986011999561356two-component sensor histidine kinase proteinQuickGO ontologyBLASTP
200016200222207hypothetical proteinBLASTP
200995202503150916S ribosomal RNA operon 2QuickGO ontologyBLASTP
20278420285774tRNA-IleQuickGO ontology
20298720305973tRNA-AlaQuickGO ontologyBLASTP
203785206406262223S ribosomal RNA operon 2QuickGO ontologyBLASTP
2065392066571195S ribosomal RNA operon 2QuickGO ontologyBLASTP
20680120687474tRNA-MetQuickGO ontology
2076042095471944methyl accepting chemotaxis proteinQuickGO ontologyBLASTP
2096352106931059spermidineputrescine ABC transporterQuickGO ontologyBLASTP
210700211488789spermidineputrescine ABC transporterQuickGO ontologyBLASTP
211491212315825spermidineputrescine ABC transporterQuickGO ontologyBLASTP
2123562133961041spermidineputrescine ABC transporterQuickGO ontologyBLASTP
2136692155461878adenine deaminaseQuickGO ontologyBLASTP
215805216644840hypothetical proteinBLASTP
216908217780873kinaseesterase proteinQuickGO ontologyBLASTP
217777218367591Two component response regulator proteinQuickGO ontologyBLASTP