Pre_GI Gene

Host: NC_011987:362997 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011987:362997 Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
100666567hypothetical protein
83919811143hypothetical proteinBLASTP
199132111221hypothetical proteinBLASTP
3629973646521656ABC-type dipeptide transport system periplasmic componentQuickGO ontologyBLASTP
365179365868690hypothetical proteinBLASTP
365939366286348hypothetical proteinBLASTP
3662893678211533transposase number 3 for insertion sequenceQuickGO ontologyBLASTP
367893368249357transposase number 2 for insertion sequenceQuickGO ontologyBLASTP
368246368689444transposase number 1 for insertion sequenceQuickGO ontologyBLASTP
3688513701101260biotin carboxylaseQuickGO ontologyBLASTP
37014137211719773-oxoacyl-ACP reductaseQuickGO ontologyBLASTP
372234373115882Transcriptional regulatorQuickGO ontologyBLASTP
3731943743931200chloramphenicol resistance proteinQuickGO ontology
3745303759691440AmidaseQuickGO ontologyBLASTP
375995376540546GCN5-family N-acetyltransferaseQuickGO ontologyBLASTP
3765993777741176hypothetical proteinBLASTP
377852378133282hypothetical protein
378134378523390hypothetical protein
3785353802891755Prenyltransferase beta subunitQuickGO ontologyBLASTP
3802863815841299coenzyme F390 synthetaseQuickGO ontologyBLASTP
381938382204267catalaseQuickGO ontologyBLASTP
382279382383105hypothetical protein
382560383003444transposase ISmav2QuickGO ontologyBLASTP
383637384371735IstB-like ATP-binding proteinQuickGO ontologyBLASTP
384397384834438hypothetical proteinBLASTP
384944385726783hypothetical proteinBLASTP
3860503871741125hypothetical protein
387471387986516hypothetical proteinBLASTP