Pre_GI Gene

Host: NC_012108:442493 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012108:442493 Desulfobacterium autotrophicum HRM2, complete genome

Host Lineage: Desulfobacterium autotrophicum; Desulfobacterium; Desulfobacteraceae; Desulfobacterales; Proteobacteria; Bacteria

General Information: It was isolated from a marine sediment in the Mediterranean sea near Venice, Italy. It is involved in the anaerobic mineralization of organic matter coming from the water column. Desulfobacterium autotrophicum is capable of growing litho-autotrophically with H2, CO2 and sulfate, but also by coupling sulfate reduction with the oxidation of fatty acids. This organism can transform tetra to dichlormethane.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
442493442840348hypothetical proteinBLASTP
443218443559342hypothetical proteinBLASTP
4438444453251482sigma-54 dependent transcriptional activator PASPAC domain proteinQuickGO ontologyBLASTP
4458724471821311KamA1QuickGO ontologyBLASTP
4474454488001356hypothetical proteinBLASTP
449250449453204hypothetical protein
449705450061357hypothetical protein
4501044530402937putative DNA helicase D10 proteinQuickGO ontologyBLASTP
453953454711759putative ferric uptake regulation proteinQuickGO ontologyBLASTP
4548374559641128putative 5-methylcytosine-specific restriction enzyme AQuickGO ontologyBLASTP
456512456931420UmuD1QuickGO ontologyBLASTP
457020457433414UmuC2QuickGO ontologyBLASTP
457460457768309UmuC3QuickGO ontologyBLASTP
457810458202393DNA-directed DNA polymeraseQuickGO ontologyBLASTP
458441458689249predicted transglycosylase associated protein YeaQQuickGO ontologyBLASTP
458845459384540hypothetical proteinBLASTP
459809460297489hypothetical proteinBLASTP
460438460809372FMN-binding proteinQuickGO ontologyBLASTP
461493461705213hypothetical protein
461716462609894MltBQuickGO ontologyBLASTP
4628014641621362RadAQuickGO ontologyBLASTP
464183464794612putative ribosomal RNA methyltransferase 1 23S rRNA methylaseQuickGO ontologyBLASTP
464807465550744hypothetical proteinBLASTP
465602466405804outer membrane lipoprotein carrier protein precursorQuickGO ontologyBLASTP
4663024678911590long-chain-fatty-acid--CoA ligase Acetyl-coenzyme A synthetaseQuickGO ontologyBLASTP
4679954699081914DnaK1QuickGO ontologyBLASTP