Pre_GI Gene

Host: NC_012125:2360815 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:2360815 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
236081523619631149cyclopropane fatty acyl phospholipid synthaseQuickGO ontologyBLASTP
23620052362646642riboflavin synthase subunit alphaQuickGO ontologyBLASTP
236286323642361374multidrug efflux proteinQuickGO ontologyBLASTP
236470923657671059secretion system apparatus protein SsaUQuickGO ontologyBLASTP
23657642366543780type III secretion proteinQuickGO ontologyBLASTP
23665442366810267type III secretion proteinQuickGO ontologyBLASTP
23668072367454648type III secretion system proteinQuickGO ontologyBLASTP
23675222368490969type III secretion system proteinQuickGO ontologyBLASTP
23684712368845375type III secretion proteinQuickGO ontologyBLASTP
23688262369203378type III secretion proteinQuickGO ontologyBLASTP
236920623705071302type III secretion system ATPaseQuickGO ontologyBLASTP
237049723724731977secretion system apparatus protein SsaVQuickGO ontologyBLASTP
23725272372895369pathogenicity island proteinQuickGO ontologyBLASTP
23729532373918966secretion system proteinQuickGO ontologyBLASTP
23739352374609675pathogenicity island proteinQuickGO ontologyBLASTP
23746062375154549pathogenicity island proteinQuickGO ontologyBLASTP
23751722375861690pathogenicity island lipoproteinQuickGO ontologyBLASTP
23759182376166249pathogenicity island proteinQuickGO ontologyBLASTP
23761782376420243pathogenicity island proteinQuickGO ontologyBLASTP
23764462376661216pathogenicity island proteinQuickGO ontologyBLASTP
23767552377444690pathogenicity island effector proteinQuickGO ontologyBLASTP
23774412378223783pathogenicity island effector proteinQuickGO ontologyBLASTP
23782392378673435pathogenicity island proteinQuickGO ontologyBLASTP
23787252379141417pathogenicity island effector proteinQuickGO ontologyBLASTP
23791442379731588pathogenicity island effector proteinQuickGO ontologyBLASTP
237974723812011455pathogenicity island effector proteinQuickGO ontologyBLASTP
23812042381677474type III secretion system chaperone proteinQuickGO ontologyBLASTP
23816742382264591pathogenicity island effector proteinQuickGO ontologyBLASTP
23822712382597327pathogenicity island proteinQuickGO ontologyBLASTP
23828002383042243secretion system proteinQuickGO ontologyBLASTP
238305023842491200pathogenicity island proteinQuickGO ontologyBLASTP
238424223857351494outer membrane secretory proteinQuickGO ontologyBLASTP
23857372386120384pathogenicity island effector proteinQuickGO ontologyBLASTP
238653923893012763two-component sensor kinaseQuickGO ontologyBLASTP
23893322389970639two-component response regulatorQuickGO ontologyBLASTP
23901492390877729transcriptional regulatorQuickGO ontologyBLASTP
23910492392008960pathogenicity island proteinQuickGO ontologyBLASTP
23921042392316213hypothetical proteinBLASTP
23924142393034621two-component response regulatorQuickGO ontologyBLASTP
239300923947871779sensory histidine kinaseQuickGO ontologyBLASTP
23949512395703753tetrathionate reductase subunit BQuickGO ontologyBLASTP
239570423967261023tetrathionate reductase subunit CQuickGO ontologyBLASTP
239671923997813063tetrathionate reductase subunit AQuickGO ontologyBLASTP