Pre_GI Gene

Host: NC_012578:224559 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012578:224559 Vibrio cholerae M66-2 chromosome I, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae M66-2 was isolated from the 1937 cholera outbreak in the Makassar area of Indonesia. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22327922459813203-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
224559225347789hypothetical proteinBLASTP
2253442263931050putative lipopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
2263902274301041ADP-heptose--LPS heptosyltransferase IIQuickGO ontologyBLASTP
2274272286261200hypothetical proteinBLASTP
228628229194567transferase hexapeptide repeat familyQuickGO ontologyBLASTP
231131232075945ADP-L-glycero-D-mannoheptose-6-epimeraseQuickGO ontologyBLASTP
2325172339141398mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
2339172353081392phosphomannomutaseQuickGO ontologyBLASTP
2353112364321122GDP-mannose 46-dehydrataseQuickGO ontologyBLASTP
2364432375461104perosamine synthaseQuickGO ontologyBLASTP
2375432389341392rfbG proteinQuickGO ontologyBLASTP
238906239700795lipopolysaccharideO-antigen transport proteinQuickGO ontologyBLASTP
239639240454816lipopolysaccharideO-antigen transport proteinQuickGO ontologyBLASTP
240493240735243putative acyl carrier proteinQuickGO ontologyBLASTP
2407412421561416rfbL proteinQuickGO ontologyBLASTP
2421652432891125putative iron-containing alcohol dehydrogenaseQuickGO ontologyBLASTP
2432802457572478acyl protein synthaseacyl-CoA reductaseQuickGO ontologyBLASTP
245827246393567acetyltransferase RfbOQuickGO ontologyBLASTP
24654324662381IS1004 transposaseQuickGO ontologyBLASTP
248086248946861rfbT-like proteinQuickGO ontologyBLASTP
2489812502131233lipopolysaccharide biosynthesis protein RfbVQuickGO ontologyBLASTP
2501012519661866mannosyl-transferaseQuickGO ontologyBLASTP
252027252167141hypothetical proteinBLASTP
252119253090972UDP-glucose 4-epimeraseQuickGO ontologyBLASTP
253098253652555putative galactosyl-transferaseQuickGO ontologyBLASTP
2537952551621368hypothetical proteinBLASTP
2554242566621239hypothetical proteinBLASTP
256717257289573hypothetical proteinBLASTP
257289258212924D-isomer specific 2-hydroxyacid dehydrogenase family proteinQuickGO ontologyBLASTP
258205258873669hypothetical proteinBLASTP
2592362604351200mannose-6-phosphate isomeraseQuickGO ontologyBLASTP
260401261381981ROK family proteinQuickGO ontologyBLASTP