Pre_GI Gene

Host: NC_012660:2143376 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:2143376 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
214337621453431968DNA topoisomerase IIIQuickGO ontologyBLASTP
21455652146035471single-stranded DNA-binding proteinQuickGO ontologyBLASTP
21460322146550519hypothetical proteinBLASTP
21465472147302756hypothetical proteinBLASTP
214751021487001191hypothetical proteinBLASTP
21486972149245549hypothetical proteinBLASTP
214924221508281587hypothetical proteinBLASTP
21508432151070228hypothetical protein
21511382151980843putative chromosome partitioning-like proteinQuickGO ontologyBLASTP
21519852152215231putative phage-like proteinQuickGO ontologyBLASTP
21523252153080756hypothetical proteinBLASTP
21533462153999654hypothetical proteinBLASTP
215412721552241098putative oxidaseQuickGO ontologyBLASTP
21553412156261921putative LysR family regulatory proteinQuickGO ontologyBLASTP
215624921574421194hypothetical proteinBLASTP
21574392158428990putative cobalamin biosynthesis-like proteinQuickGO ontologyBLASTP
21584252158724300hypothetical proteinBLASTP
21587332159482750putative 3-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
21595312160292762putative 3-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
216030821616661359putative transporter-like membrane proteinQuickGO ontologyBLASTP
21617272162608882putative polysaccharide deacetylaseQuickGO ontologyBLASTP
216267121640291359hypothetical proteinBLASTP
216433321653371005putative GntR family regulatory proteinQuickGO ontologyBLASTP
21654502166367918putative LysR family regulatory proteinQuickGO ontologyBLASTP
21664932167251759hypothetical proteinBLASTP
21673442167589246hypothetical proteinBLASTP
216760021689731374acetyl-CoA carboxylase biotin carboxylase subunitQuickGO ontologyBLASTP
21689702169842873hypothetical proteinBLASTP
21698392170813975putative hydrolaseQuickGO ontologyBLASTP
217092521722471323hypothetical proteinBLASTP
217242021736011182hypothetical proteinBLASTP
217373521750391305putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
21752082175606399hypothetical proteinBLASTP
21757062175894189hypothetical protein
21760202176169150BLASTP
217758521789611377threonine synthaseQuickGO ontologyBLASTP
21789932179430438putative AsnC family regulatory proteinQuickGO ontologyBLASTP
217960221806421041homoserine dehydrogenaseQuickGO ontologyBLASTP
218065521820671413putative dehydrogenaseQuickGO ontologyBLASTP
218230621837151410D-serineD-alanineglycine transporterQuickGO ontologyBLASTP
21844232185337915putative LysR family regulatory proteinQuickGO ontologyBLASTP
218549821867961299putative transporter-like membrane proteinQuickGO ontologyBLASTP
218694321884511509hypothetical proteinBLASTP
21887092188942234BLASTP
21889472189108162BLASTP
21893692189986618putative amino acid transporter-like proteinQuickGO ontologyBLASTP
21901292190353225hypothetical protein
219079521924351641putative transporter-like membrane proteinQuickGO ontologyBLASTP
219252321945322010putative dipeptidyl peptidaseQuickGO ontologyBLASTP
21946042195566963putative LysR family regulatory proteinQuickGO ontologyBLASTP
21955572195679123hypothetical protein
219578921969551167hypothetical proteinBLASTP
219695221987601809hypothetical proteinBLASTP
21990192199750732FKBP-type peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
22001382200596459hypothetical proteinBLASTP
22006912201032342hypothetical proteinBLASTP
22010292201400372hypothetical proteinBLASTP
220139722031661770hypothetical proteinBLASTP