Pre_GI Gene

Host: NC_012791 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012791:2423466 Variovorax paradoxus S110 chromosome 1, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
24234662424011546hypothetical protein
24240082424988981flagellar biosynthetic protein FliPQuickGO ontologyBLASTP
24250752425893819RNA polymerase sigma 28 subunit FliAWhiG subfamilyQuickGO ontologyBLASTP
242593324272011269Tetratricopeptide TPR_2 repeat proteinQuickGO ontology
24272232427696474hypothetical protein
24277482428335588Tetratricopeptide domain proteinQuickGO ontologyBLASTP
24285672429343777hypothetical proteinBLASTP
242940424316262223TPR repeat-containing proteinQuickGO ontologyBLASTP
24317862432577792hypothetical proteinBLASTP
2432885245170318819YD repeat proteinQuickGO ontologyBLASTP
24528482453291444transposase IS3IS911 family proteinQuickGO ontologyBLASTP
24537232454229507transposase IS66QuickGO ontologyBLASTP
24543572454674318putative cytoplasmic proteinQuickGO ontologyBLASTP
24548082455791984transposase IS4 family proteinQuickGO ontologyBLASTP
24558582456781924hypothetical proteinBLASTP
24567932457278486hypothetical proteinBLASTP
24572712457855585hypothetical proteinBLASTP
24579402458314375hypothetical protein
24583142458721408transcriptional regulator XRE familyQuickGO ontologyBLASTP
245875824599691212integrase family proteinQuickGO ontologyBLASTP
24602952460543249
2460674246075077tRNA-ProQuickGO ontology
24607862461490705Glutathione S-transferase domain proteinQuickGO ontologyBLASTP
246159424633121719cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
24634182464278861hypothetical proteinBLASTP
246427524665932319Polyphosphate kinaseQuickGO ontologyBLASTP