Pre_GI Gene

Host: NC_012791:4794362 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012791:4794362 Variovorax paradoxus S110 chromosome 1, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
479436247974843123DNA polymerase III alpha subunitQuickGO ontologyBLASTP
479749547988321338hypothetical proteinBLASTP
47987744799616843hypothetical proteinBLASTP
47997774800709933protein of unknown function DUF159QuickGO ontologyBLASTP
48008224801019198hypothetical proteinBLASTP
48011454801630486putative transmembrane proteinQuickGO ontology
48017304801867138hypothetical protein
48020684802523456hypothetical proteinBLASTP
48026964803058363hypothetical proteinBLASTP
48032424803667426hypothetical proteinBLASTP
48037084804475768EndonucleaseexonucleasephosphataseQuickGO ontology
48048604805258399hypothetical proteinBLASTP
48056434806221579HNH endonucleaseQuickGO ontologyBLASTP
48063874806647261BLASTP
48067344807438705hypothetical proteinBLASTP
48074674807697231hypothetical protein
4807859480795496hypothetical protein
48081984808311114hypothetical protein
48088174809650834hypothetical proteinBLASTP
48100844810350267hypothetical proteinBLASTP
48109764811194219hypothetical protein
48112054811450246hypothetical proteinBLASTP
48114474811986540nuclease SNase domain proteinQuickGO ontologyBLASTP
48120074812633627hypothetical proteinBLASTP
48126234812748126hypothetical protein
48130724813371300hypothetical protein
48137564814277522transcriptional regulator XRE familyQuickGO ontologyBLASTP
48145454814787243transcriptional regulator XRE familyQuickGO ontologyBLASTP
481490248159661065HNH nucleaseQuickGO ontologyBLASTP
48159634816355393histidine triad HIT proteinQuickGO ontologyBLASTP
481636248175041143hypothetical proteinBLASTP
481823148203572127exodeoxyribonuclease V alpha subunitQuickGO ontologyBLASTP
482035448241453792exodeoxyribonuclease V beta subunitQuickGO ontologyBLASTP
482414548276543510exodeoxyribonuclease V gamma subunitQuickGO ontologyBLASTP
48279334828376444hypothetical proteinBLASTP
482837348294431071hypothetical protein
482952548308081284protein of unknown function DUF445QuickGO ontologyBLASTP
48310804831715636hypothetical proteinBLASTP
48317684832367600hypothetical protein
48332804834260981hypothetical proteinBLASTP
483427248358731602AAA ATPaseQuickGO ontologyBLASTP
48361434836664522Appr-1-p processing domain proteinQuickGO ontologyBLASTP
483730348388861584protein of unknown function DUF88QuickGO ontologyBLASTP
483914348426823540SMC domain proteinQuickGO ontologyBLASTP
484267948439681290metallophosphoesteraseQuickGO ontologyBLASTP
484419448453991206hypothetical proteinBLASTP
484540248490883687Sigma 54 interacting domain proteinQuickGO ontologyBLASTP
48490854849774690hypothetical proteinBLASTP